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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G475400.1 Wheat plasma membrane 98.62 75.76
Os01t0175700-01 Rice plasma membrane 80.87 61.01
HORVU4Hr1G081330.4 Barley plasma membrane 80.87 60.92
HORVU3Hr1G023560.1 Barley plasma membrane 79.68 60.66
HORVU3Hr1G023480.4 Barley plasma membrane 79.68 60.66
Os01t0175600-01 Rice plasma membrane 80.28 60.57
OQU86222 Sorghum plasma membrane 78.3 59.88
Zm00001d039647_P001 Maize plasma membrane 78.9 59.7
CDY46028 Canola cytosol, golgi, plasma membrane 59.37 56.47
PGSC0003DMT400073484 Potato mitochondrion, plasma membrane 57.59 56.15
KRH23534 Soybean plasma membrane 64.3 52.75
GSMUA_Achr2P19680_001 Banana plasma membrane 68.44 52.18
Solyc06g067900.1.1 Tomato golgi 35.5 51.58
KRH09786 Soybean plasma membrane 66.27 50.22
GSMUA_Achr5P06140_001 Banana plasma membrane 65.88 50.08
VIT_11s0016g04740.t01 Wine grape plasma membrane 65.09 48.89
PGSC0003DMT400014548 Potato plasma membrane 64.89 48.89
VIT_04s0008g04980.t01 Wine grape plasma membrane 64.5 48.88
PGSC0003DMT400074816 Potato plasma membrane 62.52 48.32
CDY39649 Canola plasma membrane 63.31 47.56
KRH52492 Soybean plasma membrane 61.14 47.33
VIT_09s0002g05810.t01 Wine grape plasma membrane 64.1 47.31
KRH61813 Soybean plasma membrane 61.74 47.28
Solyc03g120020.2.1 Tomato plasma membrane 65.09 47.28
AT1G15460.1 Thale cress cytosol, golgi, peroxisome 62.52 46.41
KRH05103 Soybean plasma membrane 60.16 46.0
CDX88179 Canola plasma membrane 60.75 45.83
CDX80510 Canola plasma membrane 60.55 45.75
Bra009840.1-P Field mustard plasma membrane 59.57 45.62
CDY37274 Canola plasma membrane 61.14 45.39
Bra037053.1-P Field mustard plasma membrane 58.78 45.22
CDY13492 Canola plasma membrane 58.78 45.15
Bra008167.1-P Field mustard plasma membrane 60.55 44.95
CDY68117 Canola plasma membrane 60.55 44.95
CDX72362 Canola plasma membrane 58.58 44.93
AT5G25430.1 Thale cress golgi, peroxisome, plasma membrane 59.17 44.71
AT1G74810.4 Thale cress plasma membrane 60.16 44.66
AT4G32510.2 Thale cress plasma membrane 59.37 44.59
CDX68852 Canola plasma membrane 58.78 44.48
HORVU1Hr1G025890.7 Barley plastid 66.27 42.86
Solyc08g066960.2.1 Tomato plasma membrane 61.93 38.57
HORVU5Hr1G022140.1 Barley cytosol, golgi, plasma membrane 49.9 35.53
CDX75250 Canola plastid 58.58 24.44
Bra026129.1-P Field mustard plasma membrane 63.12 20.4
CDY36563 Canola plasma membrane 62.92 20.31
CDX68853 Canola plastid 0.0 0.0
Protein Annotations
EnsemblPlants:HORVU0Hr1G032340.2EnsemblPlantsGene:HORVU0Hr1G032340GO:GO:0003674GO:GO:0005215GO:GO:0005452GO:GO:0005575
GO:GO:0006810GO:GO:0006820GO:GO:0008150GO:GO:0015698GO:GO:0016020GO:GO:0016021
InterPro:HCO3_transpt_CInterPro:HCO3_transpt_eukPANTHER:PTHR11453PANTHER:PTHR11453:SF40PFAM:PF00955SEG:seg
TMHMM:TMhelixUniParc:UPI000B468DBBUniProt:A0A287EAY4MapMan:24.2.3.6::
Description
No Description!
Coordinates
chrchrUn:+:192879177..192883655
Molecular Weight (calculated)
57064.5 Da
IEP (calculated)
7.070
GRAVY (calculated)
0.050
Length
507 amino acids
Sequence
(BLAST)
001: MLITVLFLQE ASKGIVREFG PPKGVDNGSP IHQFQWMYLN GLLGVIFSTG LLYTALRTRR ARSWLYGLGW LRSFIADYGV PLMVIVWTAL SYALPSKVPS
101: GVPRRLFSPL PWESSSLQHW TVAKDLFSVP PAFIFAAILP ALMVAGLYFF DHSVASQLAQ QKEYNLKKPS AYHYDILVLG LMVLLCGLIG IPPSNGVLPQ
201: SPMHTRSLAV LRGQFLRKKM VETAKESVGN RASKMEIYGK LHEVFIEMDN EQNTGSVDME LKSLKEAVLR ENGEDGEQTG EFDPRKHIEP HLPVRVNEQR
301: LSNLLQSLMV GGCVAAMPVI RMIPTSVLWG YFAYMAIDSL PGNQFWERIQ LIFISSSRRY KVLEGPHASF VESVPSRTTS AFTIFQFVYL LICFGITWIP
401: IAGILFPLPF FLMIAIRQHL LPKFFEPSDL RELDTAEYEE LEGFHQEGEA GSNLGSCHSS IDAEMLDELT TNRGELKHRT VSNREERHLQ LTPTCMQVHS
501: NAVQPSV
Best Arabidopsis Sequence Match ( AT1G15460.1 )
(BLAST)
001: MEEERVDSSK RLFRGIVADL RGRALCYKED WVAGLRSGFG ILAPTTYIFF ASALPVIAFG EQLSRDTEGA LSTVETLAST ALCGVIHSIL GGQPLLILGV
101: AEPTVLMYVY LYNFAIGRPE LGKQLYLAWA AWVCVWTALL LFVMAILNTA DIINRFTRVA GELFGMLISV LFIQQAIKGM VSEFGMPKDE DSKLEKYKFE
201: WLYTNGLLGL IFTFGLLYTA LKSRKARSWR YGTGWYRSFI ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LFSPLPWDSP SLSHWTVIKD MGKVSPGYIF
301: AAFIPALMIA GLYFFDHSVA SQLAQQKEFN LKKPSAYHYD ILLLGFMTLI CGLLGLPPSN GVLPQSPMHT KSLAVLKRQL IRRKMVKTAK ESIRKRETSS
401: QVYENMQEVF IEMDKSPLAQ TDPSVIIELQ DLKEAVMKSN DEEREGDEES GFDPEKHLDA YLPVRVNEQR VSNLLQSLLV AGAVLAMPAI KLIPTSILWG
501: YFAYMAIDSL PGNQFFERLT LLFVPTSRRF KVLEGAHASF VEKVPYKSMA AFTLLQIFYF GLCYGVTWIP VAGIMFPVPF FLLIAIRQYI LPKLFNPAHL
601: RELDAAEYEE IPGTPRNPLE LSFRSNDSKR GVQEGDAEIL DELTTSRGEL KVRTLNLNED KGNQIYPKEK VKAGDGDMST TRE
Arabidopsis Description
BOR4BOR4 [Source:UniProtKB/TrEMBL;Acc:A0A178W6Z7]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.