Factsheet for Solyc01g079150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013372	Potato	plasma membrane	98.61	98.61
VIT_07s0005g02060.t01	Wine grape	plasma membrane	85.69	86.05
KXG23716	Sorghum	plasma membrane	79.86	81.1
GSMUA_Achr3P24480_001	Banana	golgi, peroxisome, plasma membrane	80.42	80.53
KRG96573	Soybean	plasma membrane	80.83	80.5
Os12t0566000-02	Rice	plasma membrane	79.44	80.45
GSMUA_Achr3P12750_001	Banana	plasma membrane	80.0	80.11
KRH68309	Soybean	plasma membrane	80.42	80.08
CDX80082	Canola	plasma membrane	77.92	79.69
CDY37790	Canola	plasma membrane	77.92	79.69
TraesCS5B01G091200.1	Wheat	plasma membrane	78.61	79.49
TraesCS5A01G085200.1	Wheat	plasma membrane	78.33	79.21
CDX83341	Canola	plasma membrane	77.36	79.12
HORVU5Hr1G022140.1	Barley	cytosol, golgi, plasma membrane	78.19	79.07
TraesCS5D01G097600.1	Wheat	plasma membrane	78.19	79.07
CDY51414	Canola	plasma membrane	77.08	79.06
AT3G62270.1	Thale cress	plasma membrane	77.08	78.95
Bra000442.1-P	Field mustard	plasma membrane	77.08	78.95
CDX93980	Canola	plasma membrane	77.36	78.9
Bra021386.1-P	Field mustard	plasma membrane	76.81	78.89
Bra014404.1-P	Field mustard	plasma membrane	77.36	78.78
CDY27507	Canola	plasma membrane	76.81	78.77
Bra004476.1-P	Field mustard	plasma membrane	76.94	78.69
CDY50920	Canola	plasma membrane	76.81	78.55
Solyc01g057770.2.1	Tomato	plasma membrane	76.25	77.0
AT2G47160.2	Thale cress	plasma membrane	76.94	75.99
Solyc06g071500.2.1	Tomato	plasma membrane	75.97	75.97
CDY69873	Canola	golgi, plasma membrane	50.56	74.29
CDY37788	Canola	cytosol	10.56	62.3
Solyc03g120020.2.1	Tomato	plasma membrane	53.75	55.44
CDY37789	Canola	endoplasmic reticulum, golgi	16.39	52.91
Solyc08g066960.2.1	Tomato	plasma membrane	52.92	46.81
Zm00001d010317_P001	Maize	cytosol, golgi, plastid	11.39	46.33
Solyc06g067900.1.1	Tomato	golgi	20.69	42.69
KRH74995	Soybean	extracellular	4.17	36.14
Zm00001d050809_P001	Maize	cytosol	5.69	29.71
Zm00001d000089_P001	Maize	cytosol	9.03	27.9
Zm00001d030297_P001	Maize	plastid	17.36	24.37

Protein Annotations

MapMan:24.2.3.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0008509
GO:GO:0009987	GO:GO:0015698	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0051453
GO:GO:0098656	InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	UniProt:K4AXG1	PFAM:PF00955	PANTHER:PTHR11453
PANTHER:PTHR11453:SF80	EnsemblPlantsGene:Solyc01g079150.2	EnsemblPlants:Solyc01g079150.2.1	TMHMM:TMhelix	UniParc:UPI0002761B34	SEG:seg

Description

No Description!

Coordinates

chr1:-:78237979..78241869

Molecular Weight (calculated)

80498.6 Da

IEP (calculated)

9.113

GRAVY (calculated)

0.109

Length

720 amino acids

Sequence
(BLAST)

001: MEETFVPFRG IKNDLHGRLL CYKQDWTSGI KAGFRILAPT TYIFFASAIP VISFGEQLER NTDGILTAVQ TLASTAICGI THSIIGGQPL LILGVAEPTV
101: IMYTFMFDFA KQRPDLGPGL FLPWTGWVCV WTAILLFLLA ILGACSIINR FTRLAGELFG MLIAMLFMQQ AIKGLVDEFR VPKRDNPHLT EFMPSWRFAN
201: GMFALVLSFG LLLTALKSRK ARSWRYGTGW LRSLIADYGV PLMVVVWTAV SYIPSESVPE RIPRRLLSPN PWSPGAYENW TVIKDMLNVP VIYILGAFVP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SFHYDLLLLG FLTLMCGLVG IPPSNGVIPQ SPMHTKSLAT LKHQLLRNRL VDTARKSMQK NSSLGQLYGN
401: MQEAYQQMQT PLIYQESSAR GLKELKESTI QLASSMGHIN APVDETIFDV EKEIDDLLPV EVKEQRVSNL LQATMVGGCV AAMPVLRMIP TSVLWGYFAY
501: MAIESLPGNQ FWERILLLFT APSRRYKVLE DYHATFVETV PFKSIVAFTI FQTLYLLACF GITWVPIAGL LFPLLIMLLV PVRQYILPRF FKGAHLQDLD
601: AADYEESPAV PFNLPMEGEF GSRPSHAENG EILDEMITRS RGEVKRINSP KITSSTATPI RDTKLLQSPR ISEKAYSPQI NKLRGQQSPL SGGRGTFSPR
701: TGEPKPSNLG TSPRTSTPND

Best Arabidopsis Sequence Match ( AT3G62270.1 )
(BLAST)

001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK

Arabidopsis Description

BOR2Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.