CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69873	Canola	golgi, plasma membrane	67.42	97.14
AT3G62270.1	Thale cress	plasma membrane	95.47	95.87
CDX80082	Canola	plasma membrane	91.22	91.48
CDY37790	Canola	plasma membrane	91.22	91.48
CDY50920	Canola	plasma membrane	90.79	91.05
CDX83341	Canola	plasma membrane	90.65	90.91
CDY51414	Canola	plasma membrane	90.08	90.6
CDY27507	Canola	plasma membrane	89.94	90.46
VIT_07s0005g02060.t01	Wine grape	plasma membrane	82.29	81.03
KXG23716	Sorghum	plasma membrane	79.46	79.13
GSMUA_Achr3P12750_001	Banana	plasma membrane	79.75	78.3
Os12t0566000-02	Rice	plasma membrane	78.61	78.06
TraesCS5A01G085200.1	Wheat	plasma membrane	78.47	77.81
TraesCS5B01G091200.1	Wheat	plasma membrane	78.19	77.53
PGSC0003DMT400013372	Potato	plasma membrane	79.04	77.5
TraesCS5D01G097600.1	Wheat	plasma membrane	78.05	77.39
Solyc01g079150.2.1	Tomato	plasma membrane	78.9	77.36
HORVU5Hr1G022140.1	Barley	cytosol, golgi, plasma membrane	77.2	76.54
GSMUA_Achr3P24480_001	Banana	golgi, peroxisome, plasma membrane	77.34	75.94
CDX74103	Canola	plasma membrane	70.54	67.48
CDY08050	Canola	plasma membrane	70.4	67.44
CDY37789	Canola	endoplasmic reticulum, golgi	21.1	66.82
CDY37788	Canola	cytosol	11.05	63.93
CDY39649	Canola	plasma membrane	55.81	58.37
CDY13492	Canola	plasma membrane	52.27	55.91
CDY68117	Canola	plasma membrane	53.97	55.78
CDY37274	Canola	plasma membrane	53.97	55.78
CDX72362	Canola	plasma membrane	52.12	55.67
CDX88179	Canola	plasma membrane	52.83	55.51
CDX80510	Canola	plasma membrane	52.69	55.44
CDX68852	Canola	plasma membrane	52.27	55.07
CDY46028	Canola	cytosol, golgi, plasma membrane	38.1	50.47
Zm00001d010317_P001	Maize	cytosol, golgi, plastid	11.76	46.89
CDX75250	Canola	plastid	51.98	30.21
Zm00001d050809_P001	Maize	cytosol	5.67	28.99
Zm00001d000089_P001	Maize	cytosol	9.35	28.33
CDY36563	Canola	plasma membrane	55.81	25.08
Zm00001d030297_P001	Maize	plastid	17.56	24.17
CDX68853	Canola	plastid	0.14	0.19

Protein Annotations

EnsemblPlants:CDX93980	EnsemblPlantsGene:GSBRNA2T00156837001	GO:A0A078DXE0	GO:GO:0003674	GO:GO:0005215	GO:GO:0005452
GO:GO:0005575	GO:GO:0006810	GO:GO:0006820	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
InterPro:HCO3_transpt_C	InterPro:HCO3_transpt_euk	PANTHER:PTHR11453	PANTHER:PTHR11453:SF51	PFAM:PF00955	ProteinID:CDX93980
ProteinID:CDX93980.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EC3637	MapMan:24.2.3.6	:

Description

BnaC04g21390D

Coordinates

chrLK031878:+:1128110..1131176

Molecular Weight (calculated)

78842.6 Da

IEP (calculated)

8.075

GRAVY (calculated)

0.201

Length

706 amino acids

Sequence
(BLAST)

001: MEETFVPFEG IKDDLKGRLR CYKQDWTGGF KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSIINR FTRVAGELFG LLIAMLFMQE AIKGLVDEFR SPEREDLKLL EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLIADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP VVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLICGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARRSIKQ NASLGQLYGN
401: MQEAYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPILKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLICFGL TWIPIAGVMF PLMIMFLIPV RQYILPRFFK GAHLQDLDAA
601: EYEEAPALPF NLAVAEDEMG STASYPCDSE ILDEVITRSR GEFRHTCSPK VTSSTSTPVY HRNLSQVFSP RVNELRGGMM SPSLAGKGQN SPKPSPLNPS
701: SSSPAN

Best Arabidopsis Sequence Match ( AT3G62270.1 )
(BLAST)

001: MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV
101: IMYTFMFNFA KGRPELGRNL FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR APAREDLKLV EFLPSWRFAN
201: GMFALVLSFG LLITALRSRK ARSWRYGTGW LRSLVADYGV PLMVLVWTGV SYIPTGDVPK GIPRRLFSPN PWSPGAYENW TVVKEMLQVP IVYIIGAFIP
301: ATMIAVLYYF DHSVASQLAQ QKEFNLRKPS SYHYDLLLLG FLTLMCGLLG IPPSNGVIPQ SPMHTKSLAT LKYQLLRNRL VATARKSIKQ NASLGQLYGN
401: MQDVYNQMQT PLVYQQPQGL KELRESTIQA TTFTGNLDAP VDETLFDIEK EIDDLLPIEV KEQRVSNLLQ AVMVGGCVAA MPLLKMIPTS VLWGYFAFMA
501: IESLPGNQFW ERILLLFTAP SRRFKVLEDN HATFVETVPF KTIAMFTIFQ TTYLLTCFGL TWIPIAGVMF PLLIMFLIPV RQYILPRFFK SAHLQDLDAA
601: EYEEAPALPF HLAVPEAEMG STASYPCDSE ILDEFITRSR GEFRHTCSPK VTSSTSTPVY NRNLSQVFSP RVIDLRGEMS PRLSGKGQNS PKPSPLNPSS
701: SSK

Arabidopsis Description

BOR2Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.