Factsheet for AT3G13640.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G19210.1	Thale cress	cytosol	80.93	80.66
AT4G30300.1	Thale cress	cytosol	18.91	62.98
CDY23627	Canola	cytosol	11.11	60.91
CDX97503	Canola	cytosol, extracellular	10.12	53.04

Protein Annotations

MapMan:17.6.1	Gene3D:3.40.50.300	InterPro:4Fe4S_Fe-S-bd	InterPro:4Fe4S_Fe_S_CS	EntrezGene:820568	InterPro:AAA+_ATPase
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEE75386.1	ArrayExpress:AT3G13640	EnsemblPlantsGene:AT3G13640	RefSeq:AT3G13640
TAIR:AT3G13640	RefSeq:AT3G13640-TAIR-G	EnsemblPlants:AT3G13640.1	TAIR:AT3G13640.1	Symbol:ATRLI1	Unigene:At.43389
ProteinID:BAB01911.1	EMBL:BT003947	EMBL:BT005042	GO:GO:0000054	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005506	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005852	GO:GO:0006412	GO:GO:0006413
GO:GO:0006415	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	GO:GO:0043024
GO:GO:0046872	GO:GO:0051536	GO:GO:0051539	InterPro:IPR003439	InterPro:IPR017896	RefSeq:NP_187973.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00037	PFAM:PF04068	PO:PO:0000037	PO:PO:0000293
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616
PO:PO:0009009	PO:PO:0009010	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009052	PO:PO:0025022	PO:PO:0025281	PRINTS:PR01868	ScanProsite:PS00198
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS51379	PANTHER:PTHR19248	PANTHER:PTHR19248:SF21	UniProt:Q9LID6
InterPro:RLI1	InterPro:RLI_dom_1	InterPro:RNaseL-inhib_metal-bd_dom	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF54862
UniParc:UPI000000C1F9	:	:	:	:	:

Description

ABCE1ABC transporter E family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID6]

Coordinates

chr3:-:4458389..4461844

Molecular Weight (calculated)

68164.6 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.277

Length

603 amino acids

Sequence
(BLAST)

001: MSDRLTRIAI VSEDRCKPKK CRQECKKSCP VVKTGKLCIE VGSTSKSAFI SEELCIGCGI CVKKCPFEAI QIINLPKDLA KDTTHRYGAN GFKLHRLPIP
101: RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFNTPPDW EEILTHFRGS ELQSYFIRVV EENLKTAIKP QHVDYIKEVV RGNLGKMLEK LDERGLMEEI
201: CADMELNQVL EREARQVSGG ELQRFAIAAV FVKKADIYMF DEPSSYLDVR QRLKAAQVIR SLLRHDSYVI VVEHDLSVLD YLSDFVCCLY GKPGAYGVVT
301: LPFSVREGIN VFLAGFIPTE NLRFRDESLT FRVSETTQEN DGEVKSYARY KYPNMTKQLG DFKLEVMEGE FTDSQIIVML GENGTGKTTF IRMLAGAFPR
401: EEGVQSEIPE FNVSYKPQGN DSKRECTVRQ LLHDKIRDAC AHPQFMSDVI RPLQIEQLMD QVVKTLSGGE KQRVAITLCL GKPADIYLID EPSAHLDSEQ
501: RITASKVIKR FILHAKKTAF IVEHDFIMAT YLADRVIVYE GQPAVKCIAH SPQSLLSGMN HFLSHLNITF RRDPTNFRPR INKLESIKDK EQKTAGSYYY
601: LDD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.