Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G19210.1 | Thale cress | cytosol | 64.64 | 19.34 |
| AT3G13640.1 | Thale cress | cytosol | 62.98 | 18.91 |
| CDX71236 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:829153 | UniProt:A0A178V187 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like |
| ProteinID:AEE85748.1 | ArrayExpress:AT4G30300 | EnsemblPlantsGene:AT4G30300 | RefSeq:AT4G30300 | TAIR:AT4G30300 | RefSeq:AT4G30300-TAIR-G |
| EnsemblPlants:AT4G30300.1 | TAIR:AT4G30300.1 | Symbol:ATNAP15 | Unigene:At.64201 | ProteinID:CAB81023.1 | EMBL:DQ056666 |
| GO:GO:0000054 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006415 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0019538 | GO:GO:0043024 | InterPro:IPR003439 | RefSeq:NP_194759.1 | ProteinID:OAP00117.1 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PANTHER:PTHR19248 | PANTHER:PTHR19248:SF21 | UniProt:Q9M0D0 | InterPro:RLI1 | SMART:SM00382 |
| SUPFAM:SSF52540 | UniParc:UPI00000A65B8 | : | : | : | : |
Description
ABCE3NAP15 [Source:UniProtKB/TrEMBL;Acc:A0A178V187]
Coordinates
chr4:-:14831005..14831550
Molecular Weight (calculated)
20633.1 Da
IEP (calculated)
9.837
GRAVY (calculated)
-0.309
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MTITRGDFKL RLNQGEFTDS QIIVMLGENG TGKTTFIKML AGSKLDIDEE GSQVHEIPQF SVSYKNQHMS NRKFEITVRD LIHRKIPNAY AEHQFVSDVM
101: KPLKIEELMD KSFNKLSGGE KQRVALALCL GKSADIYLID EPSAFLDSEQ RIIASKVIKR FILQMKKAAF ARFHNGYVFG R
101: KPLKIEELMD KSFNKLSGGE KQRVALALCL GKSADIYLID EPSAFLDSEQ RIIASKVIKR FILQMKKAAF ARFHNGYVFG R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.