Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 2
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029976.1-P | Field mustard | cytosol | 63.35 | 76.69 |
| CDX83099 | Canola | cytosol | 63.35 | 76.69 |
| CDY53331 | Canola | cytosol | 62.11 | 75.19 |
| AT5G65925.1 | Thale cress | cytosol, mitochondrion | 44.1 | 47.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:824144 | ProteinID:ABE65502.1 | ProteinID:AEE78594.1 | ArrayExpress:AT3G49820 | EnsemblPlantsGene:AT3G49820 |
| RefSeq:AT3G49820 | TAIR:AT3G49820 | RefSeq:AT3G49820-TAIR-G | EnsemblPlants:AT3G49820.1 | TAIR:AT3G49820.1 | ProteinID:CAB66920.1 |
| GO:GO:0005575 | GO:GO:0008150 | RefSeq:NP_190551.1 | PO:PO:0000230 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0009005 | PO:PO:0009025 | PO:PO:0020100 | PANTHER:PTHR33526 | PANTHER:PTHR33526:SF4 | UniProt:Q9M2X6 |
| UniParc:UPI00000AA5FB | SEG:seg | : | : | : | : |
Description
Uncharacterized protein T16K5.170 [Source:UniProtKB/TrEMBL;Acc:Q9M2X6]
Coordinates
chr3:+:18481027..18481821
Molecular Weight (calculated)
17832.2 Da
IEP (calculated)
5.709
GRAVY (calculated)
-0.383
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAKVIEKEN CFVWLVKAPF RLLIMARDAY IRSITSCSGA GIYSGGGSSG FGQLSGNFQI CDPPSTALPR SFTLTSAAHD QGCLTRGGQP TIAMRQSLSL
101: DHRKNNRCVV VMGRIDEEMS CDDDDEFQEE DSFLDYGNCE ILTKEIEKPS VDQKHKPLGR F
101: DHRKNNRCVV VMGRIDEEMS CDDDDEFQEE DSFLDYGNCE ILTKEIEKPS VDQKHKPLGR F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.