Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031843.1-P | Field mustard | mitochondrion | 78.67 | 76.13 |
| CDY37843 | Canola | mitochondrion | 77.33 | 74.84 |
| Bra024431.1-P | Field mustard | cytosol, mitochondrion | 73.33 | 73.83 |
| CDY08737 | Canola | cytosol, mitochondrion | 73.33 | 73.83 |
| CDY43586 | Canola | mitochondrion | 76.67 | 71.88 |
| AT3G49820.1 | Thale cress | extracellular, plasma membrane | 47.33 | 44.1 |
Protein Annotations
| ArrayExpress:AT5G65925 | EMBL:AK227383 | EMBL:BT010670 | EMBL:BT012417 | EnsemblPlants:AT5G65925.1 | EnsemblPlantsGene:AT5G65925 |
| EntrezGene:836722 | GO:GO:0008150 | PANTHER:PTHR33526 | PANTHER:PTHR33526:SF4 | PO:PO:0000293 | ProteinID:AED98124.1 |
| RefSeq:AT5G65925 | RefSeq:AT5G65925-TAIR-G | RefSeq:NP_680470.2 | SEG:seg | TAIR:AT5G65925 | TAIR:AT5G65925.1 |
| UniParc:UPI000019716F | UniProt:Q6NLB7 | MapMan:35.2 | : | : | : |
Description
At5g65925 [Source:UniProtKB/TrEMBL;Acc:Q6NLB7]
Coordinates
chr5:+:26369045..26369854
Molecular Weight (calculated)
16780.3 Da
IEP (calculated)
10.087
GRAVY (calculated)
-0.488
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAKEMKKES NLARLVKSPV RFLIMARDAY IRSMTSCSAG FIRGGGGSGA FGLPPGNFQI CEAPTTVLPR SFTLNSATTT RERCRFVTRG ASSGEITVET
101: TAMKRQMDLR RNYSCMVMGR IDEEKVCDQF EEEDYSKKRK IGGVFTTHQQ
101: TAMKRQMDLR RNYSCMVMGR IDEEKVCDQF EEEDYSKKRK IGGVFTTHQQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.