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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, mitochondrion

Predictor Summary:
  • plastid 1
  • cytosol 2
  • nucleus 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra010452.1-P
Bra013908.1-P
Bra013910.1-P
Bra014355.1-P
Bra025179.1-P
Bra036351.1-P
Bra037983.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65925.1 Bra014355.1-P AT1G55190.1 21798944
AT5G65925.1 Bra037983.1-P AT1G55190.1 21798944
AT5G65925.1 Bra025179.1-P AT3G26030.1 21798944
AT5G65925.1 Bra036351.1-P AT3G26030.1 21798944
AT5G65925.1 Bra010452.1-P AT4G25660.1 21798944
AT5G65925.1 Bra013908.1-P AT4G25660.1 21798944
AT5G65925.1 Bra013910.1-P AT4G25660.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08737 Canola cytosol, mitochondrion 100.0 100.0
Bra031843.1-P Field mustard mitochondrion 78.52 75.48
AT5G65925.1 Thale cress cytosol, mitochondrion 73.83 73.33
Bra029976.1-P Field mustard cytosol 46.31 51.88
Protein Annotations
EnsemblPlants:Bra024431.1EnsemblPlants:Bra024431.1-PEnsemblPlantsGene:Bra024431PANTHER:PTHR33526PANTHER:PTHR33526:SF4SEG:seg
UniParc:UPI000253EEB9UniProt:M4E6M7MapMan:35.2:::
Description
AT5G65925 (E=8e-045) | unknown protein
Coordinates
chrA06:+:15758088..15758537
Molecular Weight (calculated)
16854.6 Da
IEP (calculated)
10.410
GRAVY (calculated)
-0.434
Length
149 amino acids
Sequence
(BLAST)
001: MKAKEMKKER AIARLMKSPV RFLIMARDAY IRSMTSCSVG FITGGGSGGF GLPAGNFQIC EEPSTTLPRS FTLNTSTTTR ERCRFVTRGG ENRAAMRRPL
101: DLRRNYSCMV MGRIDEEKAC DEFEQEGLLS VSDRFKKRKL CGVFTICQR
Best Arabidopsis Sequence Match ( AT5G65925.1 )
(BLAST)
001: MKAKEMKKES NLARLVKSPV RFLIMARDAY IRSMTSCSAG FIRGGGGSGA FGLPPGNFQI CEAPTTVLPR SFTLNSATTT RERCRFVTRG ASSGEITVET
101: TAMKRQMDLR RNYSCMVMGR IDEEKVCDQF EEEDYSKKRK IGGVFTTHQQ
Arabidopsis Description
At5g65925 [Source:UniProtKB/TrEMBL;Acc:Q6NLB7]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.