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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 5
  • cytosol 1
  • golgi 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:golgi, nucleus, plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra010452.1-P
Bra013908.1-P
Bra013910.1-P
Bra014355.1-P
Bra025179.1-P
Bra036351.1-P
Bra037983.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65925.1 Bra014355.1-P AT1G55190.1 21798944
AT5G65925.1 Bra037983.1-P AT1G55190.1 21798944
AT5G65925.1 Bra025179.1-P AT3G26030.1 21798944
AT5G65925.1 Bra036351.1-P AT3G26030.1 21798944
AT5G65925.1 Bra010452.1-P AT4G25660.1 21798944
AT5G65925.1 Bra013908.1-P AT4G25660.1 21798944
AT5G65925.1 Bra013910.1-P AT4G25660.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37843 Canola mitochondrion 98.06 98.06
AT5G65925.1 Thale cress cytosol, mitochondrion 76.13 78.67
Bra024431.1-P Field mustard cytosol, mitochondrion 75.48 78.52
Bra029976.1-P Field mustard cytosol 49.03 57.14
Protein Annotations
EnsemblPlants:Bra031843.1EnsemblPlants:Bra031843.1-PEnsemblPlantsGene:Bra031843PANTHER:PTHR33526PANTHER:PTHR33526:SF4SEG:seg
UniParc:UPI0002546AD3UniProt:M4ESR3MapMan:35.2:::
Description
AT5G65925 (E=8e-046) | unknown protein
Coordinates
chrA02:+:27585401..27585868
Molecular Weight (calculated)
17276.9 Da
IEP (calculated)
9.955
GRAVY (calculated)
-0.446
Length
155 amino acids
Sequence
(BLAST)
001: MKAKKMKKES NLAKLVKSPV RFLIMARDAY IRSMTSCSAG YIRGGGGSGG FGLPAGNFQI CEEPSTTLPR SFTLNSSTTT VATRERCRFV SDYSRGGGEI
101: TVATGGPLDL RRNYSCIVMG RIDEEQACDK FEEEDLLFDK FKKRKIDRVF TIHPR
Best Arabidopsis Sequence Match ( AT5G65925.1 )
(BLAST)
001: MKAKEMKKES NLARLVKSPV RFLIMARDAY IRSMTSCSAG FIRGGGGSGA FGLPPGNFQI CEAPTTVLPR SFTLNSATTT RERCRFVTRG ASSGEITVET
101: TAMKRQMDLR RNYSCMVMGR IDEEKVCDQF EEEDYSKKRK IGGVFTTHQQ
Arabidopsis Description
At5g65925 [Source:UniProtKB/TrEMBL;Acc:Q6NLB7]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.