Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029976.1-P | Field mustard | cytosol | 99.25 | 99.25 |
| CDY53331 | Canola | cytosol | 94.74 | 94.74 |
| AT3G49820.1 | Thale cress | extracellular, plasma membrane | 76.69 | 63.35 |
| CDY37843 | Canola | mitochondrion | 57.14 | 49.03 |
| CDY43586 | Canola | mitochondrion | 56.39 | 46.88 |
| CDY08737 | Canola | cytosol, mitochondrion | 51.88 | 46.31 |
Protein Annotations
| EnsemblPlants:CDX83099 | EnsemblPlantsGene:GSBRNA2T00138606001 | InterPro:UCP031279 | PANTHER:PTHR33526 | PANTHER:PTHR33526:SF4 | PIRSF:PIRSF031279 |
| ProteinID:CDX83099 | ProteinID:CDX83099.1 | SEG:seg | UniParc:UPI0004EDC99F | MapMan:35.2 | : |
Description
BnaA01g20990D
Coordinates
chrLK031831:+:1645846..1646247
Molecular Weight (calculated)
14414.0 Da
IEP (calculated)
5.886
GRAVY (calculated)
-0.380
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPIMKGGSK EKENSFVWLV KAPFRILIMA RDAYIRSITS CSGTGILTGG GSSGFGQLSG NFQICDPPST ALPRSFTLSS PARDQGCLTG GGQLTTATRQ
101: SFPLDRRRNY RCVAVMGRID EEVSCDDESE EDH
101: SFPLDRRRNY RCVAVMGRID EEVSCDDESE EDH
001: MKAKVIEKEN CFVWLVKAPF RLLIMARDAY IRSITSCSGA GIYSGGGSSG FGQLSGNFQI CDPPSTALPR SFTLTSAAHD QGCLTRGGQP TIAMRQSLSL
101: DHRKNNRCVV VMGRIDEEMS CDDDDEFQEE DSFLDYGNCE ILTKEIEKPS VDQKHKPLGR F
101: DHRKNNRCVV VMGRIDEEMS CDDDDEFQEE DSFLDYGNCE ILTKEIEKPS VDQKHKPLGR F
Arabidopsis Description
Uncharacterized protein T16K5.170 [Source:UniProtKB/TrEMBL;Acc:Q9M2X6]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.