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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane
BaCelLo:endoplasmic reticulum, extracellular, golgi
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007731.1-P Field mustard cytosol 66.67 51.69
CDY56460 Canola cytosol 66.67 51.69
CDX76684 Canola cytosol 65.22 50.0
Protein Annotations
MapMan:35.2EntrezGene:825491UniProt:A0A178VHC3ProteinID:AEE80442.1EMBL:AF412115EMBL:AK227257
ArrayExpress:AT3G63160EnsemblPlantsGene:AT3G63160RefSeq:AT3G63160TAIR:AT3G63160RefSeq:AT3G63160-TAIR-GEnsemblPlants:AT3G63160.1
TAIR:AT3G63160.1EMBL:AY086289EMBL:BT020284EMBL:BT028876ProteinID:CAB86417.1GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0009507GO:GO:0009535
GO:GO:0009536GO:GO:0009579GO:GO:0009707GO:GO:0009941GO:GO:0016020GO:GO:0016021
RefSeq:NP_191875.1ProteinID:OAP05780.1InterPro:OEP7-likePO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0006339PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PANTHER:PTHR33982PANTHER:PTHR33982:SF1UniProt:Q9M1X3TMHMM:TMhelix
UniParc:UPI00000AA14ESEG:seg::::
Description
AT3g63160/F16M2_10 [Source:UniProtKB/TrEMBL;Acc:Q9M1X3]
Coordinates
chr3:-:23333399..23334034
Molecular Weight (calculated)
7256.8 Da
IEP (calculated)
9.870
GRAVY (calculated)
-0.158
Length
69 amino acids
Sequence
(BLAST)
1: MVEKSGGEVN FPKLEKPTGK KQTATVVVGV LAVGWLAIEL VFKPLFKKLS SSKDKSDSDD ATVPPPSGA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.