Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007731.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX76684 | Canola | cytosol | 87.64 | 86.67 |
| AT3G63160.1 | Thale cress | cytosol | 51.69 | 66.67 |
Protein Annotations
| EnsemblPlants:CDY56460 | EnsemblPlantsGene:GSBRNA2T00019610001 | GO:A0A078IX79 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:OEP7-like | PANTHER:PTHR33982 | PANTHER:PTHR33982:SF1 | ProteinID:CDY56460 | ProteinID:CDY56460.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002542BA2 | UniProt:A0A078IX79 | MapMan:35.2 | : | : |
Description
BnaA09g55760DBnaA09g55760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IX79]
Coordinates
chrLK033491:+:51146..51979
Molecular Weight (calculated)
9260.8 Da
IEP (calculated)
4.509
GRAVY (calculated)
-0.344
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MDKAPEIHFP KLEKPSGKKQ TTTVVVGALA VAWLAMEFVF KPLFNKLNSS KDKSVSEDAT APPADTAASD DATAPPTADD ATAPSTSDA
1: MVEKSGGEVN FPKLEKPTGK KQTATVVVGV LAVGWLAIEL VFKPLFKKLS SSKDKSDSDD ATVPPPSGA
Arabidopsis Description
AT3g63160/F16M2_10 [Source:UniProtKB/TrEMBL;Acc:Q9M1X3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.