Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007731.1-P | Field mustard | cytosol | 86.67 | 87.64 |
| CDY56460 | Canola | cytosol | 86.67 | 87.64 |
| AT3G63160.1 | Thale cress | cytosol | 50.0 | 65.22 |
Protein Annotations
| EnsemblPlants:CDX76684 | EnsemblPlantsGene:GSBRNA2T00127160001 | GO:A0A078CKX4 | InterPro:OEP7-like | PANTHER:PTHR33982 | PANTHER:PTHR33982:SF1 |
| ProteinID:CDX76684 | ProteinID:CDX76684.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EABC0E | MapMan:35.2 |
Description
BnaC08g32700D
Coordinates
chrLK031808:-:513612..514274
Molecular Weight (calculated)
9363.8 Da
IEP (calculated)
4.380
GRAVY (calculated)
-0.372
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MDKVPEIHFP KLEKSSGKKQ TTTVVVGALA VAWLAVEFVF KPLFNKLNSS KDKSASEDAT ADADTAPPAS DDATAPPTTD DATAPSTSDA
1: MVEKSGGEVN FPKLEKPTGK KQTATVVVGV LAVGWLAIEL VFKPLFKKLS SSKDKSDSDD ATVPPPSGA
Arabidopsis Description
AT3g63160/F16M2_10 [Source:UniProtKB/TrEMBL;Acc:Q9M1X3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.