Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT1G22740.1 | Thale cress | mitochondrion | 56.37 | 56.65 |
AT2G21880.1 | Thale cress | cytosol | 57.84 | 55.66 |
AT3G18820.1 | Thale cress | mitochondrion | 53.92 | 53.4 |
AT3G16100.1 | Thale cress | mitochondrion | 52.94 | 52.43 |
AT1G49300.1 | Thale cress | mitochondrion | 51.96 | 51.46 |
AT1G52280.1 | Thale cress | mitochondrion | 51.96 | 51.46 |
AT4G09720.3 | Thale cress | mitochondrion | 54.41 | 51.15 |
Protein Annotations
MapMan:22.8.1.7 | Gene3D:3.40.50.300 | EntrezGene:833958 | EMBL:AB071853 | ProteinID:AED94455.1 | ArrayExpress:AT5G39620 |
EnsemblPlantsGene:AT5G39620 | RefSeq:AT5G39620 | TAIR:AT5G39620 | RefSeq:AT5G39620-TAIR-G | EnsemblPlants:AT5G39620.1 | TAIR:AT5G39620.1 |
Unigene:At.26413 | Symbol:AtRABG1 | ProteinID:BAB08894.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_568566.1 |
InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF462 |
UniProt:Q948K6 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A8D9D | : | : |
Description
RABG1Ras-related protein RABG1 [Source:UniProtKB/Swiss-Prot;Acc:Q948K6]
Coordinates
chr5:-:15864166..15865782
Molecular Weight (calculated)
23497.1 Da
IEP (calculated)
8.100
GRAVY (calculated)
-0.502
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTKLKIIL LGDSGVGKTS LLKRYNDKDF KQLHNSTIYV DLVTKEICIA ERQVILQIWD TAGQERFKSL PSRFYRDTDC CVLVYDVNTL KTFESIDNWH
101: DEFIKQANPE TPTKFPFVLM GNKTDVNNGK PRVVAKEIAD QWCGSKGNIV YFETSAKAKI NVEEAFLEIA KKALTNERQI DDMERYRSVV PTIEKETPRS
201: RCSC
101: DEFIKQANPE TPTKFPFVLM GNKTDVNNGK PRVVAKEIAD QWCGSKGNIV YFETSAKAKI NVEEAFLEIA KKALTNERQI DDMERYRSVV PTIEKETPRS
201: RCSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.