Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52280.1 | Thale cress | mitochondrion | 94.17 | 94.17 |
| Solyc03g120750.2.1 | Tomato | nucleus, unclear | 90.78 | 91.22 |
| PGSC0003DMT400006517 | Potato | mitochondrion | 90.78 | 91.22 |
| VIT_09s0002g04220.t01 | Wine grape | mitochondrion | 91.26 | 90.82 |
| KRH47027 | Soybean | endoplasmic reticulum | 90.29 | 89.86 |
| KRH44355 | Soybean | mitochondrion | 90.29 | 89.86 |
| GSMUA_Achr9P05540_001 | Banana | mitochondrion | 89.32 | 88.89 |
| GSMUA_Achr7P14370_001 | Banana | mitochondrion | 89.32 | 88.89 |
| TraesCS3A01G152300.1 | Wheat | mitochondrion | 79.61 | 88.65 |
| GSMUA_Achr5P06890_001 | Banana | mitochondrion | 89.32 | 88.46 |
| GSMUA_Achr8P19790_001 | Banana | mitochondrion | 88.83 | 88.41 |
| Os01t0227300-01 | Rice | plasma membrane | 88.83 | 88.41 |
| EES02212 | Sorghum | mitochondrion | 87.86 | 87.44 |
| TraesCS3B01G179400.1 | Wheat | plastid | 87.38 | 86.96 |
| TraesCS3D01G160100.2 | Wheat | plastid | 86.89 | 86.47 |
| AT3G18820.1 | Thale cress | mitochondrion | 85.44 | 85.44 |
| HORVU3Hr1G030910.4 | Barley | mitochondrion | 61.65 | 84.67 |
| AT1G49300.1 | Thale cress | mitochondrion | 83.01 | 83.01 |
| AT1G22740.1 | Thale cress | mitochondrion | 70.39 | 71.43 |
| AT4G09720.3 | Thale cress | mitochondrion | 70.87 | 67.28 |
| AT2G21880.1 | Thale cress | cytosol | 66.02 | 64.15 |
| AT5G39620.1 | Thale cress | cytosol | 52.43 | 52.94 |
Protein Annotations
| MapMan:22.8.1.7 | Gene3D:3.40.50.300 | EntrezGene:820855 | UniProt:A0A178VHX7 | EMBL:AB071848 | ProteinID:AEE75771.1 |
| EMBL:AK227936 | ArrayExpress:AT3G16100 | EnsemblPlantsGene:AT3G16100 | RefSeq:AT3G16100 | TAIR:AT3G16100 | RefSeq:AT3G16100-TAIR-G |
| EnsemblPlants:AT3G16100.1 | TAIR:AT3G16100.1 | Symbol:ATRABG3C | EMBL:AY084691 | Unigene:At.7607 | ProteinID:BAB02676.1 |
| EMBL:BT006376 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016787 | RefSeq:NP_188231.1 | ProteinID:OAP04472.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF663 | UniProt:Q9LW76 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000005EBF4 | : |
Description
RABG3CRas-related protein RABG3c [Source:UniProtKB/Swiss-Prot;Acc:Q9LW76]
Coordinates
chr3:+:5459162..5460816
Molecular Weight (calculated)
22967.2 Da
IEP (calculated)
5.130
GRAVY (calculated)
-0.338
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRRRVLLK VIILGDSGVG KTSLMNQFVN RKFSNQYKAT IGADFLTKEV QIDDRIFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVNDV NVMKSFENLN
101: NWREEFLIQA SPSDPENFPF VVLGNKTDVD GGKSRVVTEK KAKSWCASKG NIPYFETSAK DGVNVDAAFE CIAKNALKNE PEEEVYLPDT IDVAGARQQR
201: STGCEC
101: NWREEFLIQA SPSDPENFPF VVLGNKTDVD GGKSRVVTEK KAKSWCASKG NIPYFETSAK DGVNVDAAFE CIAKNALKNE PEEEVYLPDT IDVAGARQQR
201: STGCEC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.