CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G152300.1	Wheat	mitochondrion	86.47	96.76
Os01t0227300-01	Rice	plasma membrane	96.62	96.62
TraesCS3B01G179400.1	Wheat	plastid	96.14	96.14
TraesCS3D01G160100.2	Wheat	plastid	95.65	95.65
GSMUA_Achr7P14370_001	Banana	mitochondrion	91.79	91.79
VIT_09s0002g04220.t01	Wine grape	mitochondrion	91.79	91.79
KRH47027	Soybean	endoplasmic reticulum	91.79	91.79
KRH44355	Soybean	mitochondrion	91.79	91.79
GSMUA_Achr5P06890_001	Banana	mitochondrion	91.79	91.35
GSMUA_Achr8P19790_001	Banana	mitochondrion	91.3	91.3
Solyc03g120750.2.1	Tomato	nucleus, unclear	89.37	90.24
PGSC0003DMT400006517	Potato	mitochondrion	89.37	90.24
HORVU3Hr1G030910.4	Barley	mitochondrion	65.22	90.0
AT1G52280.1	Thale cress	mitochondrion	88.41	88.83
GSMUA_Achr9P05540_001	Banana	mitochondrion	88.41	88.41
CDY52980	Canola	mitochondrion	87.92	88.35
CDY47530	Canola	mitochondrion	87.92	88.35
Bra014320.1-P	Field mustard	mitochondrion	87.92	88.35
Bra018959.1-P	Field mustard	mitochondrion	87.92	88.35
CDY02549	Canola	mitochondrion	87.92	88.35
AT3G16100.1	Thale cress	mitochondrion	87.44	87.86
Bra030395.1-P	Field mustard	mitochondrion	87.44	87.86
CDX87890	Canola	mitochondrion	87.44	87.86
CDY45632	Canola	mitochondrion	87.44	87.86
CDY68571	Canola	mitochondrion	86.96	87.38
EES18509	Sorghum	mitochondrion	85.51	85.92
EES03521	Sorghum	mitochondrion	71.01	71.36
OQU78358	Sorghum	cytosol	70.05	70.39

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	UniProt:C5XK96	EnsemblPlants:EES02212	ProteinID:EES02212	ProteinID:EES02212.2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	EnsemblPlantsGene:SORBI_3003G010400
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00081ACC02	:

Description

hypothetical protein

Coordinates

chr3:-:886557..889537

Molecular Weight (calculated)

23183.3 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.392

Length

207 amino acids

Sequence
(BLAST)

001: MATRRRMLLK VIILGDSGVG KTSLMNQYVN NRFSNQYKAT IGADFLTKEV QIDDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NVTKSFERLN
101: NWREEFLIQA SPSDPENFPF VVLGNKIDVD GGNSRTVSEK KAKAWCASKG NIPYFETSAK EGFNVEAAFE CIARNAVKNE PEEDMYLPDT IDVGGAGRQQ
201: RSSGCEC

Best Arabidopsis Sequence Match ( AT1G52280.1 )
(BLAST)

001: MSSRRRVLLK VIILGDSGVG KTSLMNQFVN RKFSNQYKAT IGADFLTKEV QIDDRIFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NVMKSFDNLN
101: NWREEFLIQA SPSDPENFPF VVLGNKTDVD GGKSRVVSEK KAKAWCASKG NIPYFETSAK EGFNVDAAFE CITKNAFKNE PEEEPYLPDT IDVAGGQQQR
201: STGCEC

Arabidopsis Description

RABG3DRas-related protein RABG3d [Source:UniProtKB/Swiss-Prot;Acc:Q9C820]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.