Factsheet for GSMUA_Achr9P05540_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
vacuole 2
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06890_001	Banana	mitochondrion	93.24	92.79
VIT_09s0002g04220.t01	Wine grape	mitochondrion	92.75	92.75
GSMUA_Achr7P14370_001	Banana	mitochondrion	92.27	92.27
GSMUA_Achr8P19790_001	Banana	mitochondrion	91.79	91.79
KRH47027	Soybean	endoplasmic reticulum	89.86	89.86
KRH44355	Soybean	mitochondrion	89.86	89.86
AT1G52280.1	Thale cress	mitochondrion	89.37	89.81
Solyc03g120750.2.1	Tomato	nucleus, unclear	88.89	89.76
PGSC0003DMT400006517	Potato	mitochondrion	88.89	89.76
AT3G16100.1	Thale cress	mitochondrion	88.89	89.32
Os01t0227300-01	Rice	plasma membrane	88.89	88.89
TraesCS3A01G152300.1	Wheat	mitochondrion	79.23	88.65
EES02212	Sorghum	mitochondrion	88.41	88.41
TraesCS3B01G179400.1	Wheat	plastid	88.41	88.41
CDY52980	Canola	mitochondrion	87.92	88.35
Bra018959.1-P	Field mustard	mitochondrion	87.92	88.35
TraesCS3D01G160100.2	Wheat	plastid	87.92	87.92
CDX87890	Canola	mitochondrion	87.44	87.86
Bra014320.1-P	Field mustard	mitochondrion	87.44	87.86
Bra030395.1-P	Field mustard	mitochondrion	87.44	87.86
CDY45632	Canola	mitochondrion	87.44	87.86
CDY02549	Canola	mitochondrion	87.44	87.86
CDY47530	Canola	mitochondrion	87.44	87.86
CDY68571	Canola	mitochondrion	86.96	87.38
HORVU3Hr1G030910.4	Barley	mitochondrion	61.84	85.33
GSMUA_Achr7P23940_001	Banana	plasma membrane	71.98	72.68
GSMUA_Achr3P20490_001	Banana	cytosol, mitochondrion	50.24	56.83
GSMUA_Achr3P20480_001	Banana	cytosol	13.04	34.18

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr9G05540_001	EnsemblPlants:GSMUA_Achr9P05540_001	EnsemblPlants:GSMUA_Achr9T05540_001
UniProt:M0TXR3	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00029635F8	:	:

Description

Ras-related protein Rab7 [Source:GMGC_GENE;Acc:GSMUA_Achr9G05540_001]

Coordinates

chr9:+:3549965..3554168

Molecular Weight (calculated)

23228.5 Da

IEP (calculated)

5.406

GRAVY (calculated)

-0.355

Length

207 amino acids

Sequence
(BLAST)

001: MASRRRKLLK VIILGDSGVG KTSLMNQYVN RKFSIQYKAT IGADFLTKEV QIDDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NVMKSFDNLN
101: NWREEFLIQA SPSDPENFPF IVLGNKTDID GGNSRVVSEK KAKHWCTSKG NIPYFETSAK EGINVESAFE CIAKIALKNE PEDDIYLPDT IDVASGGRQQ
201: RSSGCEC

Best Arabidopsis Sequence Match ( AT3G16100.1 )
(BLAST)

001: MASRRRVLLK VIILGDSGVG KTSLMNQFVN RKFSNQYKAT IGADFLTKEV QIDDRIFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVNDV NVMKSFENLN
101: NWREEFLIQA SPSDPENFPF VVLGNKTDVD GGKSRVVTEK KAKSWCASKG NIPYFETSAK DGVNVDAAFE CIAKNALKNE PEEEVYLPDT IDVAGARQQR
201: STGCEC

Arabidopsis Description

RABG3CRas-related protein RABG3c [Source:UniProtKB/Swiss-Prot;Acc:Q9LW76]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.