Factsheet for GSMUA_Achr3P20490_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
vacuole 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P23940_001	Banana	plasma membrane	63.39	56.59
Bra031220.1-P	Field mustard	cytosol	50.82	52.54
KRH59458	Soybean	endoplasmic reticulum	58.47	51.69
KRH43325	Soybean	cytosol	58.47	51.69
GSMUA_Achr8P19790_001	Banana	mitochondrion	58.47	51.69
VIT_07s0031g01720.t01	Wine grape	mitochondrion	57.92	51.46
GSMUA_Achr7P14370_001	Banana	mitochondrion	57.38	50.72
GSMUA_Achr5P06890_001	Banana	mitochondrion	57.38	50.48
GSMUA_Achr9P05540_001	Banana	mitochondrion	56.83	50.24
CDY46234	Canola	cytosol	57.38	50.0
CDY15859	Canola	cytosol	56.83	49.52
Bra030274.1-P	Field mustard	cytosol	56.83	49.52
PGSC0003DMT400080167	Potato	cytosol	50.27	48.68
KRG99717	Soybean	cytosol	19.67	48.65
CDX76964	Canola	cytosol	55.19	48.56
AT2G21880.1	Thale cress	cytosol	55.74	48.11
Solyc04g051680.2.1	Tomato	cytosol	54.1	45.21
CDY63374	Canola	mitochondrion	40.98	44.38
GSMUA_Achr3P20480_001	Banana	cytosol	16.39	37.97

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr3G20490_001	EnsemblPlants:GSMUA_Achr3P20490_001	EnsemblPlants:GSMUA_Achr3T20490_001
UniProt:M0SGB5	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002951607	SEG:seg	:

Description

Ras-related protein Rab7 [Source:GMGC_GENE;Acc:GSMUA_Achr3G20490_001]

Coordinates

chr3:+:21620767..21623635

Molecular Weight (calculated)

20279.4 Da

IEP (calculated)

7.943

GRAVY (calculated)

0.060

Length

183 amino acids

Sequence
(BLAST)

001: MASGSGTALK IIILGKRGVG KTSLINRYVL KKFHEQYVAT YGALFVTKEI LIGDAPVTLQ IWDTAGQDRF QSFCTPFYRL ADCCILLYDV NVGNSFDTLD
101: SWHDALFNQD RPLDLPKLPL ILLGNKVDVA GGKRRVVSIK RAEDWCASNG NIPYFETSAK VNFNVDSVFV HAAQFALNPD LGM

Best Arabidopsis Sequence Match ( AT1G22740.1 )
(BLAST)

001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC

Arabidopsis Description

RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.