CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76964	Canola	cytosol	79.88	64.9
CDY46234	Canola	cytosol	71.01	57.14
CDY15859	Canola	cytosol	70.41	56.67
AT2G21880.1	Thale cress	cytosol	70.41	56.13
KRG99717	Soybean	cytosol	23.08	52.7
VIT_07s0031g01720.t01	Wine grape	mitochondrion	60.95	50.0
KRH43325	Soybean	cytosol	58.58	47.83
CDX76258	Canola	cytosol	29.59	47.62
PGSC0003DMT400080167	Potato	cytosol	53.25	47.62
KRH59458	Soybean	endoplasmic reticulum	57.99	47.34
CDX99311	Canola	mitochondrion	57.4	47.09
CDX82324	Canola	mitochondrion	57.4	47.09
CDX92277	Canola	mitochondrion	56.8	46.6
CDY61984	Canola	mitochondrion	56.8	46.6
CDX91688	Canola	mitochondrion	56.21	46.34
CDY41473	Canola	mitochondrion	56.21	46.34
CDX77257	Canola	mitochondrion	56.21	46.12
CDY05073	Canola	mitochondrion	56.21	46.12
CDY16487	Canola	mitochondrion	56.21	46.12
CDY18548	Canola	plasma membrane	56.21	46.12
CDX90732	Canola	mitochondrion	56.21	46.12
CDY48910	Canola	mitochondrion	56.21	46.12
CDX95493	Canola	mitochondrion	55.62	45.63
CDY52980	Canola	mitochondrion	54.44	44.66
CDY47530	Canola	mitochondrion	54.44	44.66
CDX87890	Canola	mitochondrion	54.44	44.66
CDY45632	Canola	mitochondrion	54.44	44.66
CDY02549	Canola	mitochondrion	54.44	44.66
CDY56814	Canola	cytosol	43.79	44.05
CDY68571	Canola	mitochondrion	53.25	43.69
Solyc04g051680.2.1	Tomato	cytosol	55.03	42.47
GSMUA_Achr3P20490_001	Banana	cytosol, mitochondrion	44.38	40.98
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	36.09	37.42
CDX76260	Canola	cytosol	27.22	36.22
GSMUA_Achr3P20480_001	Banana	cytosol	15.98	34.18

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078JBD3	UniProt:A0A078JBD3	EnsemblPlants:CDY63374	ProteinID:CDY63374
ProteinID:CDY63374.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00039233001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF462	SMART:SM00173	SMART:SM00174	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0004EE300F	:	:	:

Description

BnaA09g55930DBnaA09g55930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBD3]

Coordinates

chrLK034289:+:28211..29613

Molecular Weight (calculated)

18935.5 Da

IEP (calculated)

5.274

GRAVY (calculated)

-0.257

Length

169 amino acids

Sequence
(BLAST)

001: MKTSSLRWPC KKAVLTSICR IGQELLTASP STIRIVVDKS VTLQIWDTAG QERFHSLGAA FYRGADCCVL VYDVNDLKSF ETLNTWHSEF LKQANPMEPE
101: TFPFVLIGNK TDVDGGNNRV VADMRAMEWC GAKGNIPYYE TSAKEDVNVD EAFWGVAQKT LSSELKQNM

Best Arabidopsis Sequence Match ( AT2G21880.1 )
(BLAST)

001: MDSLKNRTLL KVIVLGDSGV GKTSLMNQYV YKKFNKQYKA TIGADFVTKE LHIDEKSVTL QIWDTAGQER FQSLGAAFYR GADCCVLVYD VNNLKSFETL
101: NNWHTEFLKQ ANPMEPETFP FVLIGNKTDV DGGNSRVVSN KRAIEWCGSK GNIPYHETSA KEDTNIDEAF LSVAHIALSN ERKQSNDIYP RGQYHDSVTD
201: IIDPDQSRGC AC

Arabidopsis Description

RABG2RAB7A [Source:UniProtKB/TrEMBL;Acc:A0A178VZI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.