CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77257	Canola	mitochondrion	99.51	99.51
Bra014179.1-P	Field mustard	mitochondrion	100.0	98.1
AT1G49300.1	Thale cress	mitochondrion	96.6	96.6
CDY18548	Canola	plasma membrane	92.72	92.72
CDX92277	Canola	mitochondrion	92.23	92.23
CDX95493	Canola	mitochondrion	92.23	92.23
CDX99311	Canola	mitochondrion	92.23	92.23
CDY61984	Canola	mitochondrion	91.26	91.26
CDX82324	Canola	mitochondrion	90.78	90.78
KRH24485	Soybean	mitochondrion	90.78	90.78
KRH29476	Soybean	mitochondrion	90.78	90.78
PGSC0003DMT400001904	Potato	mitochondrion	90.78	90.78
Solyc01g109520.2.1	Tomato	plastid	90.78	90.78
VIT_03s0063g02420.t01	Wine grape	extracellular	89.32	89.32
EES18509	Sorghum	mitochondrion	85.92	85.92
HORVU3Hr1G071820.1	Barley	mitochondrion	85.92	85.92
TraesCS3A01G290200.1	Wheat	mitochondrion	85.92	85.92
TraesCS3B01G324900.1	Wheat	golgi	85.92	85.92
TraesCS3D01G290000.1	Wheat	mitochondrion	85.92	85.92
HORVU1Hr1G076530.1	Barley	mitochondrion	82.52	85.86
Os05t0516600-01	Rice	plasma membrane	85.44	85.44
TraesCS1A01G337800.1	Wheat	plastid	84.95	84.95
TraesCS1B01G350200.1	Wheat	mitochondrion	84.95	84.95
CDY02549	Canola	mitochondrion	84.95	84.95
TraesCS1D01G339700.2	Wheat	mitochondrion	84.95	84.95
CDY47530	Canola	mitochondrion	84.95	84.95
CDY52980	Canola	mitochondrion	84.95	84.95
Zm00001d038709_P001	Maize	mitochondrion	85.92	84.69
CDY68571	Canola	mitochondrion	83.98	83.98
CDY56814	Canola	cytosol	68.45	83.93
CDY45632	Canola	mitochondrion	83.5	83.5
CDX87890	Canola	mitochondrion	83.5	83.5
Zm00001d010733_P002	Maize	plasma membrane	85.44	82.63
CDX76258	Canola	cytosol	41.75	81.9
CDY41473	Canola	mitochondrion	69.9	70.24
CDX91688	Canola	mitochondrion	69.9	70.24
CDX76260	Canola	cytosol	42.72	69.29
CDY48910	Canola	mitochondrion	68.45	68.45
CDX90732	Canola	mitochondrion	66.99	66.99
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	52.91	66.87
CDY05073	Canola	mitochondrion	66.5	66.5
CDY15859	Canola	cytosol	66.02	64.76
CDY46234	Canola	cytosol	66.02	64.76
CDX76964	Canola	cytosol	65.05	64.42
CDY63374	Canola	mitochondrion	46.12	56.21

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078FUH4	UniProt:A0A078FUH4	EnsemblPlants:CDY16487	ProteinID:CDY16487
ProteinID:CDY16487.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00091078001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00019AA8C3

Description

BnaA08g02800DBnaA08g02800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUH4]

Coordinates

chrLK032064:+:403754..405342

Molecular Weight (calculated)

23126.2 Da

IEP (calculated)

4.819

GRAVY (calculated)

-0.477

Length

206 amino acids

Sequence
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV HYEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGNSRVVSEK KARAWCASKG NIPYYETSAK EGTNVEDAFM CITKNAMKSG EEEEMYMPDT IDVGTSNPQR
201: STGCEC

Best Arabidopsis Sequence Match ( AT1G49300.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC

Arabidopsis Description

RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.