CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022360.1-P	Field mustard	mitochondrion	99.51	99.51
CDX92277	Canola	mitochondrion	99.51	99.51
CDY18548	Canola	plasma membrane	98.54	98.54
CDX95493	Canola	mitochondrion	98.06	98.06
CDY61984	Canola	mitochondrion	97.57	97.57
AT3G18820.1	Thale cress	mitochondrion	97.57	97.57
CDX82324	Canola	mitochondrion	97.09	97.09
KRH24485	Soybean	mitochondrion	95.15	95.15
KRH29476	Soybean	mitochondrion	95.15	95.15
PGSC0003DMT400001904	Potato	mitochondrion	94.66	94.66
Solyc01g109520.2.1	Tomato	plastid	94.66	94.66
VIT_03s0063g02420.t01	Wine grape	extracellular	94.17	94.17
CDY16487	Canola	mitochondrion	92.23	92.23
CDX77257	Canola	mitochondrion	91.75	91.75
HORVU1Hr1G076530.1	Barley	mitochondrion	87.86	91.41
Os05t0516600-01	Rice	plasma membrane	91.26	91.26
EES18509	Sorghum	mitochondrion	90.78	90.78
TraesCS1A01G337800.1	Wheat	plastid	90.29	90.29
TraesCS1B01G350200.1	Wheat	mitochondrion	90.29	90.29
TraesCS3D01G290000.1	Wheat	mitochondrion	90.29	90.29
TraesCS1D01G339700.2	Wheat	mitochondrion	90.29	90.29
TraesCS3A01G290200.1	Wheat	mitochondrion	90.29	90.29
TraesCS3B01G324900.1	Wheat	golgi	90.29	90.29
HORVU3Hr1G071820.1	Barley	mitochondrion	90.29	90.29
Zm00001d038709_P001	Maize	mitochondrion	90.78	89.47
Zm00001d010733_P002	Maize	plasma membrane	90.29	87.32
CDY52980	Canola	mitochondrion	85.92	85.92
CDY47530	Canola	mitochondrion	85.92	85.92
CDY02549	Canola	mitochondrion	85.92	85.92
CDX87890	Canola	mitochondrion	85.44	85.44
CDY45632	Canola	mitochondrion	85.44	85.44
CDY68571	Canola	mitochondrion	84.95	84.95
CDY56814	Canola	cytosol	63.59	77.98
CDX76258	Canola	cytosol	37.86	74.29
CDY41473	Canola	mitochondrion	71.36	71.71
CDX91688	Canola	mitochondrion	71.36	71.71
CDY48910	Canola	mitochondrion	71.36	71.36
CDX90732	Canola	mitochondrion	69.42	69.42
CDY05073	Canola	mitochondrion	68.93	68.93
CDX76260	Canola	cytosol	40.78	66.14
CDX76964	Canola	cytosol	66.02	65.38
CDY15859	Canola	cytosol	66.02	64.76
CDY46234	Canola	cytosol	66.02	64.76
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	50.97	64.42
CDY63374	Canola	mitochondrion	47.09	57.4

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078EDT8	EnsemblPlants:CDX99311	ProteinID:CDX99311	ProteinID:CDX99311.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00107586001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0004EEDC3B	:

Description

BnaC05g34260D

Coordinates

chrLK031909:-:1034376..1036845

Molecular Weight (calculated)

23012.1 Da

IEP (calculated)

4.808

GRAVY (calculated)

-0.427

Length

206 amino acids

Sequence
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QVEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFDNLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD GGNSRVVSEK KAKAWCASKG NIPYFETSAK EGTNVEEAFQ CIAKNALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.