Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76258 | Canola | cytosol | 61.42 | 74.29 |
| CDY56814 | Canola | cytosol | 59.06 | 44.64 |
| CDX77257 | Canola | mitochondrion | 69.29 | 42.72 |
| CDY16487 | Canola | mitochondrion | 69.29 | 42.72 |
| AT1G49300.1 | Thale cress | mitochondrion | 68.5 | 42.23 |
| CDY18548 | Canola | plasma membrane | 66.93 | 41.26 |
| CDX95493 | Canola | mitochondrion | 66.14 | 40.78 |
| KRH24485 | Soybean | mitochondrion | 66.14 | 40.78 |
| CDX99311 | Canola | mitochondrion | 66.14 | 40.78 |
| CDX92277 | Canola | mitochondrion | 66.14 | 40.78 |
| KRH29476 | Soybean | mitochondrion | 66.14 | 40.78 |
| PGSC0003DMT400001904 | Potato | mitochondrion | 66.14 | 40.78 |
| Solyc01g109520.2.1 | Tomato | plastid | 66.14 | 40.78 |
| VIT_03s0063g02420.t01 | Wine grape | extracellular | 64.57 | 39.81 |
| CDY61984 | Canola | mitochondrion | 63.78 | 39.32 |
| CDX82324 | Canola | mitochondrion | 62.99 | 38.84 |
| CDY52980 | Canola | mitochondrion | 61.42 | 37.86 |
| CDY47530 | Canola | mitochondrion | 61.42 | 37.86 |
| CDY02549 | Canola | mitochondrion | 61.42 | 37.86 |
| CDY68571 | Canola | mitochondrion | 59.84 | 36.89 |
| CDX87890 | Canola | mitochondrion | 59.84 | 36.89 |
| CDY45632 | Canola | mitochondrion | 59.84 | 36.89 |
| TraesCS3B01G324900.1 | Wheat | golgi | 59.06 | 36.41 |
| TraesCS3A01G290200.1 | Wheat | mitochondrion | 59.06 | 36.41 |
| HORVU3Hr1G071820.1 | Barley | mitochondrion | 59.06 | 36.41 |
| TraesCS3D01G290000.1 | Wheat | mitochondrion | 59.06 | 36.41 |
| EES18509 | Sorghum | mitochondrion | 58.27 | 35.92 |
| Os05t0516600-01 | Rice | plasma membrane | 58.27 | 35.92 |
| TraesCS1D01G339700.2 | Wheat | mitochondrion | 57.48 | 35.44 |
| TraesCS1B01G350200.1 | Wheat | mitochondrion | 57.48 | 35.44 |
| TraesCS1A01G337800.1 | Wheat | plastid | 57.48 | 35.44 |
| Zm00001d038709_P001 | Maize | mitochondrion | 58.27 | 35.41 |
| HORVU1Hr1G076530.1 | Barley | mitochondrion | 54.33 | 34.85 |
| Zm00001d010733_P002 | Maize | plasma membrane | 57.48 | 34.27 |
| CDX91688 | Canola | mitochondrion | 48.82 | 30.24 |
| CDY41473 | Canola | mitochondrion | 48.82 | 30.24 |
| CDY48910 | Canola | mitochondrion | 48.82 | 30.1 |
| CDY31983 | Canola | endoplasmic reticulum, extracellular, golgi | 38.58 | 30.06 |
| CDY63374 | Canola | mitochondrion | 36.22 | 27.22 |
| CDX90732 | Canola | mitochondrion | 44.09 | 27.18 |
| CDY05073 | Canola | mitochondrion | 44.09 | 27.18 |
| CDY15859 | Canola | cytosol | 44.88 | 27.14 |
| CDY46234 | Canola | cytosol | 44.88 | 27.14 |
| CDX76964 | Canola | cytosol | 43.31 | 26.44 |
Protein Annotations
| EnsemblPlants:CDX76260 | EnsemblPlantsGene:GSBRNA2T00126616001 | Gene3D:3.40.50.300 | GO:A0A078CH86 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase |
| InterPro:Small_GTPase | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF663 | PFAM:PF00071 | ProteinID:CDX76260 | ProteinID:CDX76260.1 |
| SMART:SM00175 | SUPFAM:SSF52540 | UniParc:UPI0004EE500C | MapMan:35.1 | : | : |
Description
BnaA04g05240D
Coordinates
chrLK031806:-:2342638..2343820
Molecular Weight (calculated)
14231.8 Da
IEP (calculated)
7.087
GRAVY (calculated)
-0.645
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRRDNKDMG HGWSGKDLNN WREEFLIQAS PSDPENFPFV VIGNKIDVDG GNSRVLSEKK ARAWCASKGN IPYYETSAKD AMKSGKEEEI FCLKTCRVVG
101: LMLDLRYLSD TINVGTSNTQ RSTGCEC
101: LMLDLRYLSD TINVGTSNTQ RSTGCEC
001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC
Arabidopsis Description
RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.