CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91688	Canola	mitochondrion	99.02	99.02
AT1G22740.1	Thale cress	mitochondrion	90.24	91.13
KRH35042	Soybean	mitochondrion	85.85	85.44
KRG91731	Soybean	mitochondrion	85.85	85.44
VIT_18s0001g02250.t01	Wine grape	mitochondrion	85.37	85.37
Solyc04g072060.2.1	Tomato	plastid	84.88	85.29
CDY48910	Canola	mitochondrion	83.41	83.01
TraesCS3B01G277200.1	Wheat	mitochondrion	81.46	81.07
TraesCS3D01G248400.1	Wheat	mitochondrion	81.46	81.07
GSMUA_Achr7P23940_001	Banana	plasma membrane	80.98	80.98
TraesCS3A01G248600.1	Wheat	mitochondrion	80.98	80.58
CDY05073	Canola	mitochondrion	79.51	79.13
CDX90732	Canola	mitochondrion	79.51	79.13
EES03521	Sorghum	mitochondrion	79.02	78.64
Os01t0714900-01	Rice	plasma membrane	79.02	78.26
OQU78358	Sorghum	cytosol	76.59	76.21
Zm00001d011717_P001	Maize	mitochondrion	69.76	76.06
Os05t0536900-01	Rice	plastid	74.15	73.79
Zm00001d038842_P001	Maize	cytosol	63.9	72.38
TraesCS1D01G362800.1	Wheat	mitochondrion	73.17	72.12
TraesCS1B01G374600.1	Wheat	mitochondrion	73.17	72.12
TraesCS1A01G358000.1	Wheat	mitochondrion	72.68	71.63
CDX92277	Canola	mitochondrion	71.71	71.36
CDX99311	Canola	mitochondrion	71.71	71.36
CDY52980	Canola	mitochondrion	71.22	70.87
CDY47530	Canola	mitochondrion	71.22	70.87
CDY18548	Canola	plasma membrane	71.22	70.87
CDY02549	Canola	mitochondrion	71.22	70.87
CDX95493	Canola	mitochondrion	71.22	70.87
CDY61984	Canola	mitochondrion	70.73	70.39
CDY68571	Canola	mitochondrion	70.73	70.39
CDY45632	Canola	mitochondrion	70.73	70.39
CDX87890	Canola	mitochondrion	70.73	70.39
CDX82324	Canola	mitochondrion	70.24	69.9
CDY16487	Canola	mitochondrion	70.24	69.9
CDX77257	Canola	mitochondrion	69.76	69.42
CDY46234	Canola	cytosol	69.27	67.62
CDY15859	Canola	cytosol	68.78	67.14
CDX76964	Canola	cytosol	66.34	65.38
PGSC0003DMT400079981	Potato	mitochondrion	79.51	64.68
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	65.37	62.33
CDY56814	Canola	cytosol	49.27	60.12
Bra016372.1-P	Field mustard	plastid	99.02	58.17
CDX76258	Canola	cytosol	29.76	58.1
Zm00001d024267_P001	Maize	cytosol	31.22	57.66
Zm00001d036915_P002	Maize	cytosol	19.51	57.14
CDY63374	Canola	mitochondrion	46.34	56.21
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	44.39	55.83
VIT_18s0001g02330.t01	Wine grape	cytosol	31.22	52.46
CDX76260	Canola	cytosol	30.24	48.82
Zm00001d039546_P002	Maize	cytosol	31.71	46.76
Zm00001d040564_P001	Maize	cytosol	32.68	44.37
Zm00001d047173_P001	Maize	cytosol	32.68	44.37
Zm00001d028382_P003	Maize	cytosol	38.05	42.86
Zm00001d016749_P001	Maize	cytosol	35.12	37.5

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078HXJ7	UniProt:A0A078HXJ7	EnsemblPlants:CDY41473	ProteinID:CDY41473
ProteinID:CDY41473.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00073080001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0004EEAA2C

Description

BnaA08g20750DBnaA08g20750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXJ7]

Coordinates

chrLK032498:-:174813..176457

Molecular Weight (calculated)

23153.3 Da

IEP (calculated)

4.685

GRAVY (calculated)

-0.373

Length

205 amino acids

Sequence
(BLAST)

001: MSMRRRSLLK VIVLGDSGVG KTSLMNQYVS NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NYLKSFDSLD
101: NWHEEFLKQA SPRDPTAFPF ILLGNKVDID GGNSRVVSEK KAREWCAQMG NICYYETSAK EDYNVDESFL CITKLALANE RDQDIYFQGI PESGSEPEQR
201: GGCAC

Best Arabidopsis Sequence Match ( AT1G22740.1 )
(BLAST)

001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC

Arabidopsis Description

RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.