Factsheet for Zm00001d011717_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03521	Sorghum	mitochondrion	94.68	86.41
Os01t0714900-01	Rice	plasma membrane	92.02	83.57
TraesCS3D01G248400.1	Wheat	mitochondrion	90.43	82.52
TraesCS3B01G277200.1	Wheat	mitochondrion	90.43	82.52
TraesCS3A01G248600.1	Wheat	mitochondrion	89.89	82.04
GSMUA_Achr7P23940_001	Banana	plasma membrane	83.51	76.59
VIT_18s0001g02250.t01	Wine grape	mitochondrion	81.38	74.63
Zm00001d038842_P001	Maize	cytosol	70.74	73.48
Solyc04g072060.2.1	Tomato	plastid	79.26	73.04
KRH35042	Soybean	mitochondrion	79.26	72.33
KRG91731	Soybean	mitochondrion	78.72	71.84
AT1G22740.1	Thale cress	mitochondrion	76.6	70.94
Bra038371.1-P	Field mustard	mitochondrion	76.6	69.9
CDY48910	Canola	mitochondrion	76.6	69.9
CDX91688	Canola	mitochondrion	76.06	69.76
CDY41473	Canola	mitochondrion	76.06	69.76
CDX90732	Canola	mitochondrion	75.53	68.93
CDY05073	Canola	mitochondrion	75.53	68.93
Bra000689.1-P	Field mustard	mitochondrion	75.53	68.93
AT4G09720.3	Thale cress	mitochondrion	78.72	68.2
Zm00001d024267_P001	Maize	cytosol	39.36	66.67
Zm00001d038709_P001	Maize	mitochondrion	73.4	66.03
Zm00001d010733_P002	Maize	plasma membrane	72.87	64.32
PGSC0003DMT400079981	Potato	mitochondrion	79.26	59.13
Zm00001d040564_P001	Maize	cytosol	43.09	53.64
Zm00001d047173_P001	Maize	cytosol	43.09	53.64
VIT_18s0001g02330.t01	Wine grape	cytosol	34.57	53.28
Zm00001d036915_P002	Maize	cytosol	19.15	51.43
Zm00001d016749_P001	Maize	cytosol	44.68	43.75
Zm00001d028382_P003	Maize	cytosol	41.49	42.86
Zm00001d039546_P002	Maize	cytosol	31.38	42.45
Bra016372.1-P	Field mustard	plastid	77.13	41.55

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	UniProt:A0A1D6G3A9	ProteinID:AQK97840.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF586	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI000844BC62	EnsemblPlantsGene:Zm00001d011717	EnsemblPlants:Zm00001d011717_P001	EnsemblPlants:Zm00001d011717_T001	:

Description

Ras-related protein RABG3a

Coordinates

chr8:-:159811366..159814712

Molecular Weight (calculated)

21430.6 Da

IEP (calculated)

8.049

GRAVY (calculated)

-0.339

Length

188 amino acids

Sequence
(BLAST)

001: MSTSRRRTLL KVIVLGDSGM RIKVKIMQKI YVHKKFSQQY KATIGADFVT KEVLIEDRLV TLQIWDTAGQ ERFQSLGVAF YRGADCCVLV YDVNSNRSFD
101: TLNTWHDEFL NQASPSDPKT FPFILLGNKI DVDGGKSRVV SDKKAMEWCA SKGNIPYFET SAKEDYNVDN AFLTVAKLAL EHERDQDM

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.