Factsheet for Zm00001d016749_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047173_P001	Maize	cytosol	76.56	97.35
Zm00001d040564_P001	Maize	cytosol	76.56	97.35
Zm00001d024267_P001	Maize	cytosol	49.48	85.59
Zm00001d036915_P002	Maize	cytosol	21.88	60.0
Zm00001d038842_P001	Maize	cytosol	49.48	52.49
Zm00001d028382_P003	Maize	cytosol	47.4	50.0
OQU78358	Sorghum	cytosol	50.0	46.6
Zm00001d011717_P001	Maize	mitochondrion	43.75	44.68
VIT_18s0001g02330.t01	Wine grape	cytosol	27.6	43.44
Zm00001d039546_P002	Maize	cytosol	31.25	43.17
TraesCS1B01G374600.1	Wheat	mitochondrion	45.31	41.83
TraesCS1D01G362800.1	Wheat	mitochondrion	45.31	41.83
TraesCS1A01G358000.1	Wheat	mitochondrion	44.79	41.35
Os05t0536900-01	Rice	plastid	43.23	40.29
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	43.75	39.07
GSMUA_Achr7P23940_001	Banana	plasma membrane	41.67	39.02
VIT_18s0001g02250.t01	Wine grape	mitochondrion	41.67	39.02
Solyc04g072060.2.1	Tomato	plastid	40.1	37.75
KRH35042	Soybean	mitochondrion	40.1	37.38
KRG91731	Soybean	mitochondrion	39.58	36.89
CDY48910	Canola	mitochondrion	38.54	35.92
Bra038371.1-P	Field mustard	mitochondrion	38.54	35.92
AT1G22740.1	Thale cress	mitochondrion	37.5	35.47
CDY41473	Canola	mitochondrion	37.5	35.12
CDX91688	Canola	mitochondrion	37.5	35.12
AT4G09720.3	Thale cress	mitochondrion	39.06	34.56
CDY05073	Canola	mitochondrion	36.98	34.47
CDX90732	Canola	mitochondrion	36.98	34.47
Bra000689.1-P	Field mustard	mitochondrion	36.98	34.47
Zm00001d038709_P001	Maize	mitochondrion	34.38	31.58
Zm00001d010733_P002	Maize	plasma membrane	34.38	30.99
PGSC0003DMT400079981	Potato	mitochondrion	40.1	30.56
Bra016372.1-P	Field mustard	plastid	38.02	20.92

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6HA57	ProteinID:AQK71590.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF479	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI000221E0E2	EnsemblPlantsGene:Zm00001d016749	EnsemblPlants:Zm00001d016749_P001	EnsemblPlants:Zm00001d016749_T001

Description

Ras-related protein RABG3a

Coordinates

chr5:-:174940402..174942443

Molecular Weight (calculated)

21918.9 Da

IEP (calculated)

6.082

GRAVY (calculated)

-0.603

Length

192 amino acids

Sequence
(BLAST)

001: MQAGPSDPQR FLFILVGNKI DLDGGSKRMV PEKKAREWCA SKGNIPYFKT SAKEVHNVDT AFLCIARLAL EHEHDQDMRS FNTLDTWHDE FLNQAGPSDP
101: QRFPFILVGN KIDLDDGSKQ MIRNTLQSLC LSRRKAREWC ASKGDIPYFE TSAKEDHNVD TAFLCMARLA LEHEHDQDML PNPGHSQIDL QF

Best Arabidopsis Sequence Match ( AT1G22740.1 )
(BLAST)

001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC

Arabidopsis Description

RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.