Factsheet for VIT_18s0001g02330.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036915_P002	Maize	cytosol	31.97	55.71
Zm00001d024267_P001	Maize	cytosol	45.9	50.45
VIT_18s0001g02250.t01	Wine grape	mitochondrion	67.21	40.0
KRH35042	Soybean	mitochondrion	63.93	37.86
KRG91731	Soybean	mitochondrion	63.11	37.38
Bra038371.1-P	Field mustard	mitochondrion	61.48	36.41
CDY48910	Canola	mitochondrion	61.48	36.41
Solyc04g072060.2.1	Tomato	plastid	60.66	36.27
Zm00001d047173_P001	Maize	cytosol	44.26	35.76
Zm00001d040564_P001	Maize	cytosol	44.26	35.76
Zm00001d038842_P001	Maize	cytosol	51.64	34.81
Zm00001d011717_P001	Maize	mitochondrion	53.28	34.57
EES03521	Sorghum	mitochondrion	57.38	33.98
AT4G09720.3	Thale cress	mitochondrion	59.84	33.64
Zm00001d028382_P003	Maize	cytosol	50.0	33.52
TraesCS3A01G248600.1	Wheat	mitochondrion	55.74	33.01
Os01t0714900-01	Rice	plasma membrane	55.74	32.85
Bra000689.1-P	Field mustard	mitochondrion	54.92	32.52
CDX90732	Canola	mitochondrion	54.92	32.52
TraesCS3B01G277200.1	Wheat	mitochondrion	54.92	32.52
TraesCS3D01G248400.1	Wheat	mitochondrion	54.92	32.52
CDY05073	Canola	mitochondrion	54.92	32.52
Zm00001d039546_P002	Maize	cytosol	36.89	32.37
Os05t0536900-01	Rice	plastid	54.1	32.04
AT1G22740.1	Thale cress	mitochondrion	53.28	32.02
GSMUA_Achr7P23940_001	Banana	plasma membrane	52.46	31.22
CDX91688	Canola	mitochondrion	52.46	31.22
CDY41473	Canola	mitochondrion	52.46	31.22
OQU78358	Sorghum	cytosol	52.46	31.07
TraesCS1D01G362800.1	Wheat	mitochondrion	52.46	30.77
TraesCS1B01G374600.1	Wheat	mitochondrion	52.46	30.77
TraesCS1A01G358000.1	Wheat	mitochondrion	52.46	30.77
VIT_09s0002g04220.t01	Wine grape	mitochondrion	51.64	30.43
VIT_03s0063g02420.t01	Wine grape	extracellular	49.18	29.13
PGSC0003DMT400079981	Potato	mitochondrion	59.84	28.97
VIT_07s0031g01720.t01	Wine grape	mitochondrion	47.54	28.16
Zm00001d016749_P001	Maize	cytosol	43.44	27.6
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	48.36	27.44
Bra016372.1-P	Field mustard	plastid	53.28	18.62
VIT_00s0425g00010.t01	Wine grape	cytosol	2.46	4.17
VIT_06s0009g00750.t01	Wine grape	mitochondrion	1.64	2.2

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	ProteinID:CCB52332	ProteinID:CCB52332.1	UniProt:F6HJD3	EMBL:FN595772
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF663	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI00021087E4	ArrayExpress:VIT_18s0001g02330
EnsemblPlantsGene:VIT_18s0001g02330	EnsemblPlants:VIT_18s0001g02330.t01	:	:	:	:

Description

No Description!

Coordinates

chr18_random:+:2655274..2664147

Molecular Weight (calculated)

13542.9 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.720

Length

122 amino acids

Sequence
(BLAST)

001: MDIEMITGQS PPANPSDPKT FPFILLGNKI DIDGGNSRVV SKKKAEDWCA SKGNIPYFET SAKEDYNVDA AFLCIAKTAL ANEHEQDMDE KFRNVKSKNW
101: ELHRSNHPHA SGCITKTAST TK

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.