Factsheet for Zm00001d024267_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036915_P002	Maize	cytosol	40.54	64.29
Zm00001d047173_P001	Maize	cytosol	73.87	54.3
Zm00001d040564_P001	Maize	cytosol	73.87	54.3
Zm00001d016749_P001	Maize	cytosol	85.59	49.48
Zm00001d028382_P003	Maize	cytosol	80.18	48.9
Zm00001d038842_P001	Maize	cytosol	79.28	48.62
VIT_18s0001g02330.t01	Wine grape	cytosol	50.45	45.9
OQU78358	Sorghum	cytosol	77.48	41.75
Zm00001d039546_P002	Maize	cytosol	51.35	41.01
Zm00001d011717_P001	Maize	mitochondrion	66.67	39.36
TraesCS1B01G374600.1	Wheat	mitochondrion	69.37	37.02
TraesCS1D01G362800.1	Wheat	mitochondrion	69.37	37.02
TraesCS1A01G358000.1	Wheat	mitochondrion	68.47	36.54
Os05t0536900-01	Rice	plastid	65.77	35.44
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	67.57	34.88
GSMUA_Achr7P23940_001	Banana	plasma membrane	63.96	34.63
VIT_18s0001g02250.t01	Wine grape	mitochondrion	63.06	34.15
Solyc04g072060.2.1	Tomato	plastid	61.26	33.33
KRH35042	Soybean	mitochondrion	61.26	33.01
KRG91731	Soybean	mitochondrion	60.36	32.52
AT1G22740.1	Thale cress	mitochondrion	58.56	32.02
CDY48910	Canola	mitochondrion	58.56	31.55
Bra038371.1-P	Field mustard	mitochondrion	58.56	31.55
CDY41473	Canola	mitochondrion	57.66	31.22
CDX91688	Canola	mitochondrion	57.66	31.22
AT4G09720.3	Thale cress	mitochondrion	58.56	29.95
CDY05073	Canola	mitochondrion	54.95	29.61
CDX90732	Canola	mitochondrion	54.95	29.61
Bra000689.1-P	Field mustard	mitochondrion	54.95	29.61
PGSC0003DMT400079981	Potato	mitochondrion	61.26	26.98
Zm00001d038709_P001	Maize	mitochondrion	50.45	26.79
Zm00001d010733_P002	Maize	plasma membrane	50.45	26.29
Bra016372.1-P	Field mustard	plastid	58.56	18.62

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6IYF3	ProteinID:AQK40916.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF479	SMART:SM00175
SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI000842EDB3	EnsemblPlantsGene:Zm00001d024267	EnsemblPlants:Zm00001d024267_P001	EnsemblPlants:Zm00001d024267_T001

Description

Ras-related protein RABG3a

Coordinates

chr10:+:60073377..60074308

Molecular Weight (calculated)

12592.5 Da

IEP (calculated)

4.583

GRAVY (calculated)

-0.732

Length

111 amino acids

Sequence
(BLAST)

001: MSAAHRRSFN TLDTWHDEFL NQADPSDPQR FPFILVGNKI DSDGGSKRMV PEKKAREWCA SKGDIPYFET SAKEDHNVDT AFLCIASLAL EHEHDQDMLP
101: NPGDSQIDLQ F

Best Arabidopsis Sequence Match ( AT1G22740.1 )
(BLAST)

001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC

Arabidopsis Description

RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.