CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038371.1-P	Field mustard	mitochondrion	99.51	99.51
CDX90732	Canola	mitochondrion	91.26	91.26
CDY05073	Canola	mitochondrion	91.26	91.26
VIT_18s0001g02250.t01	Wine grape	mitochondrion	87.38	87.8
Solyc04g072060.2.1	Tomato	plastid	85.92	86.76
KRH35042	Soybean	mitochondrion	86.41	86.41
KRG91731	Soybean	mitochondrion	85.92	85.92
AT4G09720.3	Thale cress	mitochondrion	90.29	85.71
CDY41473	Canola	mitochondrion	83.01	83.41
CDX91688	Canola	mitochondrion	82.52	82.93
TraesCS3A01G248600.1	Wheat	mitochondrion	81.07	81.07
TraesCS3D01G248400.1	Wheat	mitochondrion	80.58	80.58
TraesCS3B01G277200.1	Wheat	mitochondrion	80.58	80.58
GSMUA_Achr7P23940_001	Banana	plasma membrane	79.13	79.51
EES03521	Sorghum	mitochondrion	79.13	79.13
Os01t0714900-01	Rice	plasma membrane	78.64	78.26
Zm00001d011717_P001	Maize	mitochondrion	69.9	76.6
OQU78358	Sorghum	cytosol	74.76	74.76
Os05t0536900-01	Rice	plastid	73.79	73.79
TraesCS1B01G374600.1	Wheat	mitochondrion	73.79	73.08
TraesCS1D01G362800.1	Wheat	mitochondrion	73.3	72.6
TraesCS1A01G358000.1	Wheat	mitochondrion	73.3	72.6
CDY18548	Canola	plasma membrane	71.84	71.84
CDX95493	Canola	mitochondrion	71.84	71.84
CDY61984	Canola	mitochondrion	71.36	71.36
CDX92277	Canola	mitochondrion	71.36	71.36
CDX99311	Canola	mitochondrion	71.36	71.36
Zm00001d038842_P001	Maize	cytosol	62.62	71.27
CDX82324	Canola	mitochondrion	70.87	70.87
CDX87890	Canola	mitochondrion	70.39	70.39
CDY45632	Canola	mitochondrion	70.39	70.39
CDY02549	Canola	mitochondrion	69.9	69.9
CDY52980	Canola	mitochondrion	69.9	69.9
CDY47530	Canola	mitochondrion	69.9	69.9
CDY68571	Canola	mitochondrion	69.42	69.42
CDY16487	Canola	mitochondrion	68.45	68.45
CDY46234	Canola	cytosol	69.42	68.1
CDX77257	Canola	mitochondrion	67.96	67.96
CDY15859	Canola	cytosol	68.93	67.62
CDX76964	Canola	cytosol	66.5	65.87
PGSC0003DMT400079981	Potato	mitochondrion	79.61	65.08
VIT_18s0001g02330.t01	Wine grape	cytosol	36.41	61.48
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	64.08	61.4
Zm00001d036915_P002	Maize	cytosol	20.39	60.0
Zm00001d024267_P001	Maize	cytosol	31.55	58.56
CDX76258	Canola	cytosol	29.61	58.1
CDY56814	Canola	cytosol	46.12	56.55
CDY63374	Canola	mitochondrion	46.12	56.21
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	43.69	55.21
Zm00001d039546_P002	Maize	cytosol	33.01	48.92
CDX76260	Canola	cytosol	30.1	48.82
Zm00001d040564_P001	Maize	cytosol	33.98	46.36
Zm00001d047173_P001	Maize	cytosol	33.98	46.36
Zm00001d028382_P003	Maize	cytosol	38.84	43.96
Zm00001d016749_P001	Maize	cytosol	35.92	38.54

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078IDE7	UniProt:A0A078IDE7	EnsemblPlants:CDY48910	ProteinID:CDY48910
ProteinID:CDY48910.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00091995001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0004EEB0C3

Description

BnaA09g22850DBnaA09g22850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDE7]

Coordinates

chrLK032800:-:116273..117786

Molecular Weight (calculated)

22817.8 Da

IEP (calculated)

4.911

GRAVY (calculated)

-0.305

Length

206 amino acids

Sequence
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH NKFSLQYKAT IGADFVTKEL QIGDKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDL NVSKSFDSLD
101: NWHEEFLKQA NPSDPKTFPF IVLGNKVDID GGRSRVVSEK KAADWCASNG NIPYFETSAK EDYNVDEAFL TIAKTALANE HDQDIYFQGI PEAVIENEPR
201: GGGCAC

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.