Factsheet for Zm00001d039546_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036915_P002	Maize	cytosol	41.01	81.43
Zm00001d024267_P001	Maize	cytosol	41.01	51.35
Zm00001d028382_P003	Maize	cytosol	56.83	43.41
Zm00001d038842_P001	Maize	cytosol	55.4	42.54
OQU78358	Sorghum	cytosol	56.83	38.35
VIT_18s0001g02330.t01	Wine grape	cytosol	32.37	36.89
Zm00001d047173_P001	Maize	cytosol	38.85	35.76
Zm00001d040564_P001	Maize	cytosol	38.85	35.76
Os05t0536900-01	Rice	plastid	52.52	35.44
TraesCS1B01G374600.1	Wheat	mitochondrion	52.52	35.1
TraesCS1D01G362800.1	Wheat	mitochondrion	51.8	34.62
TraesCS1A01G358000.1	Wheat	mitochondrion	51.08	34.13
Solyc04g072060.2.1	Tomato	plastid	49.64	33.82
VIT_18s0001g02250.t01	Wine grape	mitochondrion	49.64	33.66
KRH35042	Soybean	mitochondrion	49.64	33.5
CDY48910	Canola	mitochondrion	48.92	33.01
KRG91731	Soybean	mitochondrion	48.92	33.01
GSMUA_Achr7P23940_001	Banana	plasma membrane	48.2	32.68
Bra038371.1-P	Field mustard	mitochondrion	48.2	32.52
AT1G22740.1	Thale cress	mitochondrion	46.76	32.02
CDY41473	Canola	mitochondrion	46.76	31.71
CDX91688	Canola	mitochondrion	46.76	31.71
Zm00001d011717_P001	Maize	mitochondrion	42.45	31.38
Zm00001d016749_P001	Maize	cytosol	43.17	31.25
CDY05073	Canola	mitochondrion	46.04	31.07
Bra000689.1-P	Field mustard	mitochondrion	46.04	31.07
CDX90732	Canola	mitochondrion	46.04	31.07
AT4G09720.3	Thale cress	mitochondrion	47.48	30.41
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	44.6	28.84
Zm00001d038709_P001	Maize	mitochondrion	39.57	26.32
Zm00001d010733_P002	Maize	plasma membrane	39.57	25.82
PGSC0003DMT400079981	Potato	mitochondrion	43.88	24.21
Bra016372.1-P	Field mustard	plastid	47.48	18.91

Protein Annotations

EnsemblPlants:Zm00001d039546_P002	EnsemblPlants:Zm00001d039546_T002	EnsemblPlantsGene:Zm00001d039546	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase
InterPro:Small_GTPase	PANTHER:PTHR24073	PANTHER:PTHR24073:SF479	PFAM:PF00071	PFscan:PS51419	ProteinID:ONM29166.1
SUPFAM:SSF52540	UniParc:UPI000843D8D6	UniProt:A0A1D6MIA8	MapMan:35.1	:	:

Description

Ras-related protein RABG3a

Coordinates

chr3:-:7807319..7812238

Molecular Weight (calculated)

15944.8 Da

IEP (calculated)

4.991

GRAVY (calculated)

-0.302

Length

139 amino acids

Sequence
(BLAST)

001: MWMGEDFSHL RSGEESIFKV VPTLRRRVTE YISITTFCYF PYKSENSRSV DVLGLKTAFA TFMVSLPFPQ VPEKKAREWC ASKGDIPYFE TSAKEDHNVD
101: TAFLCIARLA LEHEHDQDIY FKTVVEQVPD TEQTSGCAC

Best Arabidopsis Sequence Match ( AT1G22740.1 )
(BLAST)

001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC

Arabidopsis Description

RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.