Factsheet for Zm00001d038842_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036915_P002	Maize	cytosol	35.91	92.86
OQU78358	Sorghum	cytosol	95.03	83.5
Zm00001d024267_P001	Maize	cytosol	48.62	79.28
TraesCS1B01G374600.1	Wheat	mitochondrion	86.74	75.48
TraesCS1D01G362800.1	Wheat	mitochondrion	85.64	74.52
TraesCS1A01G358000.1	Wheat	mitochondrion	85.64	74.52
Os05t0536900-01	Rice	plastid	82.87	72.82
Zm00001d011717_P001	Maize	mitochondrion	73.48	70.74
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	81.77	68.84
VIT_18s0001g02250.t01	Wine grape	mitochondrion	77.35	68.29
GSMUA_Achr7P23940_001	Banana	plasma membrane	76.8	67.8
Solyc04g072060.2.1	Tomato	plastid	76.24	67.65
KRH35042	Soybean	mitochondrion	76.8	67.48
KRG91731	Soybean	mitochondrion	76.24	66.99
AT1G22740.1	Thale cress	mitochondrion	71.82	64.04
CDY41473	Canola	mitochondrion	72.38	63.9
CDX91688	Canola	mitochondrion	72.38	63.9
Zm00001d040564_P001	Maize	cytosol	52.49	62.91
Zm00001d047173_P001	Maize	cytosol	52.49	62.91
CDY48910	Canola	mitochondrion	71.27	62.62
Bra038371.1-P	Field mustard	mitochondrion	71.27	62.62
CDX90732	Canola	mitochondrion	70.17	61.65
Bra000689.1-P	Field mustard	mitochondrion	70.17	61.65
CDY05073	Canola	mitochondrion	69.61	61.16
Zm00001d028382_P003	Maize	cytosol	61.33	60.99
AT4G09720.3	Thale cress	mitochondrion	71.27	59.45
Zm00001d038709_P001	Maize	mitochondrion	66.85	57.89
Zm00001d010733_P002	Maize	plasma membrane	66.85	56.81
Zm00001d039546_P002	Maize	cytosol	42.54	55.4
VIT_18s0001g02330.t01	Wine grape	cytosol	34.81	51.64
PGSC0003DMT400079981	Potato	mitochondrion	71.27	51.19
Zm00001d016749_P001	Maize	cytosol	52.49	49.48
Bra016372.1-P	Field mustard	plastid	72.38	37.54

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	UniProt:A0A1D6MB85	ProteinID:AQK88032.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF479	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI000844AC78	EnsemblPlantsGene:Zm00001d038842	EnsemblPlants:Zm00001d038842_P001	EnsemblPlants:Zm00001d038842_T001	:

Description

Ras-related protein RABG3a

Coordinates

chr6:+:165642539..165644249

Molecular Weight (calculated)

20530.2 Da

IEP (calculated)

5.063

GRAVY (calculated)

-0.400

Length

181 amino acids

Sequence
(BLAST)

001: MTRYVSKKFS QQYKATIGAD FLTKEVLIGD RLVTLQIWDT AGQERFQSLG VAFYRGADCC VLVYDVNVKR SFNTLDTWHD EFLNQAGPSD PQRFPFILVG
101: NKIDLDGGSK RMVPEKKARE WCASKGDIPY FETSAKEDHN VDTAFLCIAR LALEHEHDQD IYFKTVAEQV PDTEQTSGCA C

Best Arabidopsis Sequence Match ( AT4G09720.2 )
(BLAST)

001: MQYKATIGAD FVTKELQIGE KLVTLQIWDT AGQERFQSLG AAFYRGADCC ALVYDVNVLR SFDNLETWHE EFLKQASPSD PKTFPFIVLG NKIDVDGGSS
101: RVVSDKKAAD WCASNGNIPY FETSAKDDFN VDEAFLTIAK TALANEHEQD IYFQGIPDAV TENEPKGGGC AC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.