Factsheet for Bra016372.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
vacuole 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91688	Canola	mitochondrion	58.17	99.02
CDY41473	Canola	mitochondrion	58.17	99.02
AT1G22740.1	Thale cress	mitochondrion	53.58	92.12
KRH35042	Soybean	mitochondrion	50.72	85.92
KRG91731	Soybean	mitochondrion	50.72	85.92
VIT_18s0001g02250.t01	Wine grape	mitochondrion	50.43	85.85
Solyc04g072060.2.1	Tomato	plastid	50.14	85.78
Bra038371.1-P	Field mustard	mitochondrion	49.0	83.01
TraesCS3D01G248400.1	Wheat	mitochondrion	48.14	81.55
TraesCS3B01G277200.1	Wheat	mitochondrion	48.14	81.55
TraesCS3A01G248600.1	Wheat	mitochondrion	47.85	81.07
GSMUA_Achr7P23940_001	Banana	plasma membrane	47.56	80.98
Bra000689.1-P	Field mustard	mitochondrion	46.7	79.13
EES03521	Sorghum	mitochondrion	46.7	79.13
Os01t0714900-01	Rice	plasma membrane	46.7	78.74
Zm00001d011717_P001	Maize	mitochondrion	41.55	77.13
OQU78358	Sorghum	cytosol	44.99	76.21
Os05t0536900-01	Rice	plastid	44.13	74.76
TraesCS1D01G362800.1	Wheat	mitochondrion	43.55	73.08
TraesCS1B01G374600.1	Wheat	mitochondrion	43.55	73.08
TraesCS1A01G358000.1	Wheat	mitochondrion	43.27	72.6
Zm00001d038842_P001	Maize	cytosol	37.54	72.38
Bra022360.1-P	Field mustard	mitochondrion	42.69	72.33
Bra018959.1-P	Field mustard	mitochondrion	42.41	71.84
Bra014320.1-P	Field mustard	mitochondrion	42.41	71.84
Bra030395.1-P	Field mustard	mitochondrion	42.12	71.36
Bra001724.1-P	Field mustard	mitochondrion	41.83	70.87
Bra037557.1-P	Field mustard	cytosol	36.68	70.33
Bra014179.1-P	Field mustard	mitochondrion	41.83	69.52
Bra031220.1-P	Field mustard	cytosol	34.96	68.93
Bra030274.1-P	Field mustard	cytosol	40.69	67.62
PGSC0003DMT400079981	Potato	mitochondrion	46.99	65.08
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	39.26	63.72
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	23.21	61.36
Zm00001d036915_P002	Maize	cytosol	11.75	58.57
Zm00001d024267_P001	Maize	cytosol	18.62	58.56
VIT_18s0001g02330.t01	Wine grape	cytosol	18.62	53.28
Zm00001d039546_P002	Maize	cytosol	18.91	47.48
Zm00001d040564_P001	Maize	cytosol	19.48	45.03
Zm00001d047173_P001	Maize	cytosol	19.48	45.03
Zm00001d028382_P003	Maize	cytosol	22.64	43.41
Zm00001d016749_P001	Maize	cytosol	20.92	38.02

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra016372	EnsemblPlants:Bra016372.1	EnsemblPlants:Bra016372.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4DIP5	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00025465C4	:	:

Description

AT1G22740 (E=1e-093) RAB7, ATRABG3B, RAB75, RABG3B | RABG3B; GTP binding

Coordinates

chrA08:-:18106821..18109686

Molecular Weight (calculated)

38974.6 Da

IEP (calculated)

8.715

GRAVY (calculated)

-0.360

Length

349 amino acids

Sequence
(BLAST)

001: MLTFPLCGCE LSSESKTLAF AASLISISQT RRQIVLGRRD SVKVSAAKSG NFSLGSIFKS CDTCGAKGAI ECPGCKGTGR NKKNGNIFER WKCFDCQGFG
101: MKSCPKCGKG DRTWRFFAFL NPKNRVKYKK LWNMSMRRRS LLKVIVLGDS GVGKTSLMNQ ICGSLNGSLC RYVNNKFSQQ YKATIGADFV TKELQIDDRL
201: VTLQIWDTAG QERFQSLGVA FYRGADCCVL VYDVNYLKSF DSLDNWHEEF LKQASPRDPT AFPFILLGNK VDIDGGNSRV VSEKKAREWC AQKGNICYYE
301: TSAKEDYNVD ESFLCITKLA LANERDQDIY FQGIPESGSE PEQRGGCAC

Best Arabidopsis Sequence Match ( AT1G22740.1 )
(BLAST)

001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC

Arabidopsis Description

RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.