Factsheet for Bra014179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 5
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16487	Canola	mitochondrion	98.1	100.0
CDX77257	Canola	mitochondrion	97.62	99.51
AT1G49300.1	Thale cress	mitochondrion	94.76	96.6
Bra022360.1-P	Field mustard	mitochondrion	90.48	92.23
Bra037557.1-P	Field mustard	cytosol	79.52	91.76
KRH24485	Soybean	mitochondrion	89.05	90.78
KRH29476	Soybean	mitochondrion	89.05	90.78
PGSC0003DMT400001904	Potato	mitochondrion	89.05	90.78
Solyc01g109520.2.1	Tomato	plastid	89.05	90.78
Bra001724.1-P	Field mustard	mitochondrion	89.05	90.78
VIT_03s0063g02420.t01	Wine grape	extracellular	87.62	89.32
TraesCS3D01G290000.1	Wheat	mitochondrion	84.29	85.92
TraesCS3B01G324900.1	Wheat	golgi	84.29	85.92
TraesCS3A01G290200.1	Wheat	mitochondrion	84.29	85.92
EES18509	Sorghum	mitochondrion	84.29	85.92
HORVU3Hr1G071820.1	Barley	mitochondrion	84.29	85.92
HORVU1Hr1G076530.1	Barley	mitochondrion	80.95	85.86
Os05t0516600-01	Rice	plasma membrane	83.81	85.44
TraesCS1A01G337800.1	Wheat	plastid	83.33	84.95
TraesCS1B01G350200.1	Wheat	mitochondrion	83.33	84.95
TraesCS1D01G339700.2	Wheat	mitochondrion	83.33	84.95
Bra018959.1-P	Field mustard	mitochondrion	83.33	84.95
Bra014320.1-P	Field mustard	mitochondrion	83.33	84.95
Zm00001d038709_P001	Maize	mitochondrion	84.29	84.69
Bra030395.1-P	Field mustard	mitochondrion	81.9	83.5
Zm00001d010733_P002	Maize	plasma membrane	83.81	82.63
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	46.19	73.48
Bra038371.1-P	Field mustard	mitochondrion	67.62	68.93
Bra031220.1-P	Field mustard	cytosol	57.14	67.8
Bra000689.1-P	Field mustard	mitochondrion	65.24	66.5
Bra030274.1-P	Field mustard	cytosol	64.76	64.76
Bra016372.1-P	Field mustard	plastid	69.52	41.83

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra014179	EnsemblPlants:Bra014179.1	EnsemblPlants:Bra014179.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4DCG5	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000254653B	:	:

Description

AT1G49300 (E=1e-113) ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding

Coordinates

chrA08:-:2757669..2758953

Molecular Weight (calculated)

23627.9 Da

IEP (calculated)

4.959

GRAVY (calculated)

-0.482

Length

210 amino acids

Sequence
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYPK LYVNKKFSNQ YKATIGADFL TKEVHYEDRL FTLQIWDTAG QERFQSLGVA FYRGADCCVL VYDVNSAKSF
101: EDLNNWREEF LIQASPSDPE NFPFVVIGNK IDVDGGNSRV VSEKKARAWC ASKGNIPYYE TSAKEGTNVE DAFMCITKNA MKSGEEEEMY MPDTIDVGTS
201: NPQRSTGCEC

Best Arabidopsis Sequence Match ( AT1G49300.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC

Arabidopsis Description

RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.