Factsheet for Bra031220.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76964	Canola	cytosol	97.18	82.69
Bra030274.1-P	Field mustard	cytosol	88.7	74.76
AT2G21880.1	Thale cress	cytosol	85.88	71.7
VIT_07s0031g01720.t01	Wine grape	mitochondrion	74.01	63.59
PGSC0003DMT400080167	Potato	cytosol	65.54	61.38
KRH43325	Soybean	cytosol	70.06	59.9
KRH59458	Soybean	endoplasmic reticulum	69.49	59.42
Bra000689.1-P	Field mustard	mitochondrion	68.93	59.22
Bra038371.1-P	Field mustard	mitochondrion	68.93	59.22
Bra001724.1-P	Field mustard	mitochondrion	68.36	58.74
Bra022360.1-P	Field mustard	mitochondrion	67.8	58.25
Bra037557.1-P	Field mustard	cytosol	59.89	58.24
Bra014179.1-P	Field mustard	mitochondrion	67.8	57.14
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	41.24	55.3
Bra030395.1-P	Field mustard	mitochondrion	63.84	54.85
Bra018959.1-P	Field mustard	mitochondrion	63.84	54.85
Bra014320.1-P	Field mustard	mitochondrion	63.84	54.85
Solyc04g051680.2.1	Tomato	cytosol	66.1	53.42
KRG99717	Soybean	cytosol	22.03	52.7
GSMUA_Achr3P20490_001	Banana	cytosol, mitochondrion	52.54	50.82
Bra016372.1-P	Field mustard	plastid	68.93	34.96
GSMUA_Achr3P20480_001	Banana	cytosol	15.25	34.18

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra031220	EnsemblPlants:Bra031220.1	EnsemblPlants:Bra031220.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4EQZ7	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF462	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002542F63	:	:

Description

AT2G21880 (E=2e-077) ATRAB7A, ATRABG2 | ATRAB7A; GTP binding

Coordinates

chrA09:+:31958217..31961075

Molecular Weight (calculated)

20065.7 Da

IEP (calculated)

5.057

GRAVY (calculated)

-0.385

Length

177 amino acids

Sequence
(BLAST)

001: MESLKNRTLL KVIVLGDSGY VYKKFNRQYK ATIGADFVTK ELHIEDKSVT LQIWDTAGQE RFHSLGAAFY RGADCCVLVY DVNDLKSFET LNTWHSEFLK
101: QANPMEPETF PFVLIGNKTD VDGGNNRVVA DMRAMEWCGA KGNIPYYETS AKEDVNVDEA FWGVAQKTLS SELKQNM

Best Arabidopsis Sequence Match ( AT2G21880.1 )
(BLAST)

001: MDSLKNRTLL KVIVLGDSGV GKTSLMNQYV YKKFNKQYKA TIGADFVTKE LHIDEKSVTL QIWDTAGQER FQSLGAAFYR GADCCVLVYD VNNLKSFETL
101: NNWHTEFLKQ ANPMEPETFP FVLIGNKTDV DGGNSRVVSN KRAIEWCGSK GNIPYHETSA KEDTNIDEAF LSVAHIALSN ERKQSNDIYP RGQYHDSVTD
201: IIDPDQSRGC AC

Arabidopsis Description

RABG2RAB7A [Source:UniProtKB/TrEMBL;Acc:A0A178VZI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.