Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031220.1-P | Field mustard | cytosol | 82.69 | 97.18 |
| CDY46234 | Canola | cytosol | 86.06 | 85.24 |
| CDY15859 | Canola | cytosol | 85.58 | 84.76 |
| AT2G21880.1 | Thale cress | cytosol | 82.21 | 80.66 |
| CDY63374 | Canola | mitochondrion | 64.9 | 79.88 |
| VIT_07s0031g01720.t01 | Wine grape | mitochondrion | 68.75 | 69.42 |
| KRH43325 | Soybean | cytosol | 66.83 | 67.15 |
| KRH59458 | Soybean | endoplasmic reticulum | 66.35 | 66.67 |
| CDX82324 | Canola | mitochondrion | 65.87 | 66.5 |
| CDY48910 | Canola | mitochondrion | 65.87 | 66.5 |
| CDX91688 | Canola | mitochondrion | 65.38 | 66.34 |
| CDY41473 | Canola | mitochondrion | 65.38 | 66.34 |
| CDX99311 | Canola | mitochondrion | 65.38 | 66.02 |
| CDX92277 | Canola | mitochondrion | 65.38 | 66.02 |
| CDY61984 | Canola | mitochondrion | 65.38 | 66.02 |
| CDY05073 | Canola | mitochondrion | 64.9 | 65.53 |
| CDY18548 | Canola | plasma membrane | 64.9 | 65.53 |
| CDX90732 | Canola | mitochondrion | 64.9 | 65.53 |
| CDX95493 | Canola | mitochondrion | 64.42 | 65.05 |
| CDY16487 | Canola | mitochondrion | 64.42 | 65.05 |
| CDX77257 | Canola | mitochondrion | 64.42 | 65.05 |
| CDY47530 | Canola | mitochondrion | 62.02 | 62.62 |
| CDY52980 | Canola | mitochondrion | 62.02 | 62.62 |
| CDX87890 | Canola | mitochondrion | 62.02 | 62.62 |
| CDY45632 | Canola | mitochondrion | 62.02 | 62.62 |
| CDY02549 | Canola | mitochondrion | 62.02 | 62.62 |
| CDY68571 | Canola | mitochondrion | 61.06 | 61.65 |
| PGSC0003DMT400080167 | Potato | cytosol | 55.77 | 61.38 |
| Solyc04g051680.2.1 | Tomato | cytosol | 62.5 | 59.36 |
| KRG99717 | Soybean | cytosol | 19.71 | 55.41 |
| GSMUA_Achr3P20490_001 | Banana | cytosol, mitochondrion | 48.56 | 55.19 |
| CDY31983 | Canola | endoplasmic reticulum, extracellular, golgi | 41.35 | 52.76 |
| CDX76258 | Canola | cytosol | 26.44 | 52.38 |
| CDY56814 | Canola | cytosol | 41.83 | 51.79 |
| CDX76260 | Canola | cytosol | 26.44 | 43.31 |
| GSMUA_Achr3P20480_001 | Banana | cytosol | 14.9 | 39.24 |
Protein Annotations
| MapMan:22.8.1.7 | Gene3D:3.40.50.300 | GO:A0A078CLS2 | EnsemblPlants:CDX76964 | ProteinID:CDX76964 | ProteinID:CDX76964.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00127509001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF462 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EF14FC | : |
Description
BnaC08g35500D
Coordinates
chrLK031808:+:2314679..2315871
Molecular Weight (calculated)
23483.7 Da
IEP (calculated)
5.709
GRAVY (calculated)
-0.390
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLKNRTLL KVIFLGDSGV GKTSLMNQYV YKKFNRQYKA TIGADFVTKE LHIEDKSVTL QIWDTAGQER FHSLGAAFYR GADCCVLVYD VNDLKSFETL
101: NTWHSEFLKQ ANPTEPETFP FVLIGNKTDV DGGNNRVVAD KRAIEWCGAK GNIPYYETSA KEDVNVDEAF WGVAQKTLSS ELKQNIYIPV ISESFADIHE
201: GQSRRCSC
101: NTWHSEFLKQ ANPTEPETFP FVLIGNKTDV DGGNNRVVAD KRAIEWCGAK GNIPYYETSA KEDVNVDEAF WGVAQKTLSS ELKQNIYIPV ISESFADIHE
201: GQSRRCSC
001: MDSLKNRTLL KVIVLGDSGV GKTSLMNQYV YKKFNKQYKA TIGADFVTKE LHIDEKSVTL QIWDTAGQER FQSLGAAFYR GADCCVLVYD VNNLKSFETL
101: NNWHTEFLKQ ANPMEPETFP FVLIGNKTDV DGGNSRVVSN KRAIEWCGSK GNIPYHETSA KEDTNIDEAF LSVAHIALSN ERKQSNDIYP RGQYHDSVTD
201: IIDPDQSRGC AC
101: NNWHTEFLKQ ANPMEPETFP FVLIGNKTDV DGGNSRVVSN KRAIEWCGSK GNIPYHETSA KEDTNIDEAF LSVAHIALSN ERKQSNDIYP RGQYHDSVTD
201: IIDPDQSRGC AC
Arabidopsis Description
RABG2RAB7A [Source:UniProtKB/TrEMBL;Acc:A0A178VZI8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.