Factsheet for VIT_07s0031g01720.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
vacuole 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g02250.t01	Wine grape	mitochondrion	78.64	79.02
VIT_00s0425g00010.t01	Wine grape	cytosol	27.18	77.78
KRH59458	Soybean	endoplasmic reticulum	76.21	75.85
KRH43325	Soybean	cytosol	76.21	75.85
Bra031220.1-P	Field mustard	cytosol	63.59	74.01
CDY46234	Canola	cytosol	72.82	71.43
AT2G21880.1	Thale cress	cytosol	73.3	71.23
VIT_09s0002g04220.t01	Wine grape	mitochondrion	71.36	71.01
Bra030274.1-P	Field mustard	cytosol	72.33	70.95
CDY15859	Canola	cytosol	72.33	70.95
VIT_03s0063g02420.t01	Wine grape	extracellular	70.39	70.39
CDX76964	Canola	cytosol	69.42	68.75
KRG99717	Soybean	cytosol	23.79	66.22
Solyc04g051680.2.1	Tomato	cytosol	68.45	64.38
PGSC0003DMT400080167	Potato	cytosol	58.74	64.02
VIT_06s0009g00750.t01	Wine grape	mitochondrion	27.18	61.54
CDY63374	Canola	mitochondrion	50.0	60.95
GSMUA_Achr3P20490_001	Banana	cytosol, mitochondrion	51.46	57.92
VIT_18s0001g02330.t01	Wine grape	cytosol	28.16	47.54
GSMUA_Achr3P20480_001	Banana	cytosol	14.56	37.97

Protein Annotations

EntrezGene:100249299	wikigene:100249299	MapMan:22.8.1.7	Gene3D:3.40.50.300	ProteinID:CCB47126	ProteinID:CCB47126.1
UniProt:F6H4B5	EMBL:FN595233	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EntrezGene:LOC100249299	wikigene:LOC100249299	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0002109562	ArrayExpress:VIT_07s0031g01720	EnsemblPlantsGene:VIT_07s0031g01720	EnsemblPlants:VIT_07s0031g01720.t01	RefSeq:XP_002279477
RefSeq:XP_002279477.1	RefSeq:XP_010652865.1	:	:	:	:

Description

No Description!

Coordinates

chr7:+:17810822..17812678

Molecular Weight (calculated)

23018.1 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.269

Length

206 amino acids

Sequence
(BLAST)

001: MAAPRRTLLK VIVLGDSGVG KTSLMNQYVY KKFSQQYKAT IGADFVTKEL QIDDKLVTLQ LWDTAGQERF QSLGSAFYRG ADCCVLVYDV NVLKSFESLQ
101: SWHEEFLKQQ ADPAEPEVFP FVVLGNKVDV DGGNSRVVSE RRAREWCASR GDIPYFETSA KEDFNVDAAF LCVARVGLSN EHGQENYFRA ISEVVSETEQ
201: KGGCAC

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.