Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 2
- cytosol 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0009g00750.t01 | Wine grape | mitochondrion | 91.67 | 72.53 |
| VIT_18s0001g02250.t01 | Wine grape | mitochondrion | 83.33 | 29.27 |
| VIT_07s0031g01720.t01 | Wine grape | mitochondrion | 77.78 | 27.18 |
| VIT_03s0063g02420.t01 | Wine grape | extracellular | 72.22 | 25.24 |
| VIT_09s0002g04220.t01 | Wine grape | mitochondrion | 70.83 | 24.64 |
| VIT_18s0001g02330.t01 | Wine grape | cytosol | 4.17 | 2.46 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | ProteinID:CBI18756 | ProteinID:CBI18756.3 | UniProt:D7SSX2 | EMBL:FN594993 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF586 | SMART:SM00175 | SUPFAM:SSF52540 | InterPro:Small_GTPase | UniParc:UPI0001BE15AA | ArrayExpress:VIT_00s0425g00010 |
| EnsemblPlantsGene:VIT_00s0425g00010 | EnsemblPlants:VIT_00s0425g00010.t01 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:28623374..28623696
Molecular Weight (calculated)
8232.0 Da
IEP (calculated)
8.720
GRAVY (calculated)
-0.004
Length
72 amino acids
Sequence
(BLAST)
(BLAST)
1: YVHKKFSQQY KATIGANFVT KELQIDDRLV TLHILDIARQ ERFQSLGVAF YRGADCCVLV YDVSVNSILH KG
001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC
Arabidopsis Description
RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.