Factsheet for Solyc04g051680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080167	Potato	cytosol	84.47	97.88
VIT_07s0031g01720.t01	Wine grape	mitochondrion	64.38	68.45
Solyc04g072060.2.1	Tomato	plastid	63.47	68.14
Bra031220.1-P	Field mustard	cytosol	53.42	66.1
CDY46234	Canola	cytosol	61.64	64.29
Bra030274.1-P	Field mustard	cytosol	61.19	63.81
CDY15859	Canola	cytosol	61.19	63.81
KRH43325	Soybean	cytosol	59.82	63.28
KRH59458	Soybean	endoplasmic reticulum	59.82	63.28
Solyc01g109520.2.1	Tomato	plastid	58.9	62.62
CDX76964	Canola	cytosol	59.36	62.5
Solyc03g120750.2.1	Tomato	nucleus, unclear	58.45	62.44
AT2G21880.1	Thale cress	cytosol	60.27	62.26
KRG99717	Soybean	cytosol	18.72	55.41
CDY63374	Canola	mitochondrion	42.47	55.03
GSMUA_Achr3P20490_001	Banana	cytosol, mitochondrion	45.21	54.1
GSMUA_Achr3P20480_001	Banana	cytosol	14.16	39.24

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	UniProt:K4BSC7	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	EnsemblPlantsGene:Solyc04g051680.2
EnsemblPlants:Solyc04g051680.2.1	TIGRFAMs:TIGR00231	UniParc:UPI000276735D	SEG:seg	:	:

Description

Ras-related protein RABG2 [Source:Projected from Arabidopsis thaliana (AT2G21880) UniProtKB/Swiss-Prot;Acc:Q9SJ11]

Coordinates

chr4:-:50982372..50985730

Molecular Weight (calculated)

24710.2 Da

IEP (calculated)

4.669

GRAVY (calculated)

-0.284

Length

219 amino acids

Sequence
(BLAST)

001: MSQPLRSLLK VIVLGDCGVG KTSLVNQYVF KKFREQYKAT IGADFATKEL EIGERVVTLQ IWDTAGQERF HSLGVAFYRG ADCCILVYDV NVPKSFETLQ
101: HWHEEFIKQA DLTEPEKFPF VLIGNKVDLE YGSTEIVSEK QAREWCGCRG NIQNFMTSAK EDYNVDAAFL CAAQLALANE DDHNIWQASL DEEMPSHCQL
201: QRIPESVSGI EQQRGGCSC

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.