CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76260	Canola	cytosol	74.29	61.42
CDX77257	Canola	mitochondrion	81.9	41.75
CDY16487	Canola	mitochondrion	81.9	41.75
CDY56814	Canola	cytosol	65.71	41.07
AT1G49300.1	Thale cress	mitochondrion	79.05	40.29
Solyc01g109520.2.1	Tomato	plastid	76.19	38.84
PGSC0003DMT400001904	Potato	mitochondrion	76.19	38.84
CDY18548	Canola	plasma membrane	75.24	38.35
KRH29476	Soybean	mitochondrion	75.24	38.35
KRH24485	Soybean	mitochondrion	75.24	38.35
CDX92277	Canola	mitochondrion	74.29	37.86
CDX99311	Canola	mitochondrion	74.29	37.86
CDX95493	Canola	mitochondrion	74.29	37.86
CDY61984	Canola	mitochondrion	73.33	37.38
CDY52980	Canola	mitochondrion	73.33	37.38
VIT_03s0063g02420.t01	Wine grape	extracellular	73.33	37.38
CDY47530	Canola	mitochondrion	73.33	37.38
CDY02549	Canola	mitochondrion	73.33	37.38
TraesCS3D01G290000.1	Wheat	mitochondrion	72.38	36.89
TraesCS3B01G324900.1	Wheat	golgi	72.38	36.89
TraesCS3A01G290200.1	Wheat	mitochondrion	72.38	36.89
CDX82324	Canola	mitochondrion	72.38	36.89
HORVU3Hr1G071820.1	Barley	mitochondrion	72.38	36.89
HORVU1Hr1G076530.1	Barley	mitochondrion	69.52	36.87
CDY45632	Canola	mitochondrion	71.43	36.41
CDX87890	Canola	mitochondrion	71.43	36.41
CDY68571	Canola	mitochondrion	71.43	36.41
EES18509	Sorghum	mitochondrion	71.43	36.41
Os05t0516600-01	Rice	plasma membrane	70.48	35.92
Zm00001d038709_P001	Maize	mitochondrion	71.43	35.89
TraesCS1A01G337800.1	Wheat	plastid	69.52	35.44
TraesCS1B01G350200.1	Wheat	mitochondrion	69.52	35.44
TraesCS1D01G339700.2	Wheat	mitochondrion	69.52	35.44
Zm00001d010733_P002	Maize	plasma membrane	70.48	34.74
CDX91688	Canola	mitochondrion	58.1	29.76
CDY41473	Canola	mitochondrion	58.1	29.76
CDY48910	Canola	mitochondrion	58.1	29.61
CDY63374	Canola	mitochondrion	47.62	29.59
CDX90732	Canola	mitochondrion	53.33	27.18
CDY05073	Canola	mitochondrion	53.33	27.18
CDY15859	Canola	cytosol	53.33	26.67
CDY46234	Canola	cytosol	53.33	26.67
CDX76964	Canola	cytosol	52.38	26.44
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	40.0	25.77

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078CMF7	EnsemblPlants:CDX76258	ProteinID:CDX76258	ProteinID:CDX76258.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00126613001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI0004EDFBCA

Description

BnaA04g05220D

Coordinates

chrLK031806:-:2336880..2338250

Molecular Weight (calculated)

11728.9 Da

IEP (calculated)

5.229

GRAVY (calculated)

-0.551

Length

105 amino acids

Sequence
(BLAST)

001: MKGKLCILYM GHGWSGKDLN NWREEFLIQA SPSDPENFSF VVIGKKIDVD GGKSRVVSEK KARAWCASKG NIPYYETSAK EGTNVEDAFM CITKDAMKSG
101: EEEEI

Best Arabidopsis Sequence Match ( AT1G49300.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC

Arabidopsis Description

RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.