Factsheet for Zm00001d038709_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18509	Sorghum	mitochondrion	98.56	100.0
Os05t0516600-01	Rice	plasma membrane	98.09	99.51
HORVU1Hr1G076530.1	Barley	mitochondrion	93.3	98.48
Zm00001d010733_P002	Maize	plasma membrane	99.52	97.65
TraesCS1D01G339700.2	Wheat	mitochondrion	96.17	97.57
TraesCS1B01G350200.1	Wheat	mitochondrion	96.17	97.57
TraesCS1A01G337800.1	Wheat	plastid	96.17	97.57
Bra022360.1-P	Field mustard	mitochondrion	89.95	91.26
CDX92277	Canola	mitochondrion	89.95	91.26
CDX99311	Canola	mitochondrion	89.47	90.78
CDY61984	Canola	mitochondrion	89.47	90.78
Bra001724.1-P	Field mustard	mitochondrion	89.0	90.29
CDX82324	Canola	mitochondrion	89.0	90.29
CDX95493	Canola	mitochondrion	89.0	90.29
CDY18548	Canola	plasma membrane	89.0	90.29
AT3G18820.1	Thale cress	mitochondrion	88.52	89.81
Bra037557.1-P	Field mustard	cytosol	77.99	89.56
VIT_03s0063g02420.t01	Wine grape	extracellular	88.04	89.32
PGSC0003DMT400001904	Potato	mitochondrion	88.04	89.32
Solyc01g109520.2.1	Tomato	plastid	88.04	89.32
KRH24485	Soybean	mitochondrion	86.6	87.86
KRH29476	Soybean	mitochondrion	86.6	87.86
CDY16487	Canola	mitochondrion	84.69	85.92
AT1G49300.1	Thale cress	mitochondrion	84.69	85.92
CDX77257	Canola	mitochondrion	84.21	85.44
Bra014179.1-P	Field mustard	mitochondrion	84.69	84.29
Zm00001d011717_P001	Maize	mitochondrion	66.03	73.4
CDY56814	Canola	cytosol	57.42	71.43
CDX76258	Canola	cytosol	35.89	71.43
Zm00001d038842_P001	Maize	cytosol	57.89	66.85
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	42.11	66.67
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	48.8	62.58
CDX76260	Canola	cytosol	35.41	58.27
Zm00001d024267_P001	Maize	cytosol	26.79	50.45
Zm00001d036915_P002	Maize	cytosol	16.27	48.57
Zm00001d040564_P001	Maize	cytosol	29.67	41.06
Zm00001d047173_P001	Maize	cytosol	29.67	41.06
Zm00001d039546_P002	Maize	cytosol	26.32	39.57
Zm00001d028382_P003	Maize	cytosol	33.49	38.46
Zm00001d016749_P001	Maize	cytosol	31.58	34.38

Protein Annotations

EntrezGene:100383121	MapMan:22.8.1.7	Gene3D:3.40.50.300	UniProt:A0A1D6M9Y7	ProteinID:AQK87613.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF663
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000844C3DF	EnsemblPlantsGene:Zm00001d038709	EnsemblPlants:Zm00001d038709_P001	EnsemblPlants:Zm00001d038709_T001

Description

Ras-related protein RABG3f

Coordinates

chr6:+:163106824..163109751

Molecular Weight (calculated)

23351.6 Da

IEP (calculated)

5.419

GRAVY (calculated)

-0.359

Length

209 amino acids

Sequence
(BLAST)

001: MASRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ VRLIWDTAGQ ERFQSLGVAF YRGADCCVLV YDVNSMKSFD
101: NLNNWREEFL IQASPSDPDN FPFVLLGNKV DVDGGNSRVV SEKKAKAWCA SKGNIPYFET SAKDGTNVED AFQCIVKNAL KNEPEEELYV PDTVDVVGGN
201: RAQRSSGCC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.