CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
vacuole 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001724.1-P	Field mustard	mitochondrion	100.0	100.0
CDY61984	Canola	mitochondrion	99.51	99.51
CDX92277	Canola	mitochondrion	97.57	97.57
CDX95493	Canola	mitochondrion	97.09	97.09
CDX99311	Canola	mitochondrion	97.09	97.09
AT3G18820.1	Thale cress	mitochondrion	96.6	96.6
CDY18548	Canola	plasma membrane	96.6	96.6
VIT_03s0063g02420.t01	Wine grape	extracellular	94.17	94.17
KRH24485	Soybean	mitochondrion	94.17	94.17
KRH29476	Soybean	mitochondrion	94.17	94.17
Solyc01g109520.2.1	Tomato	plastid	94.17	94.17
PGSC0003DMT400001904	Potato	mitochondrion	94.17	94.17
HORVU1Hr1G076530.1	Barley	mitochondrion	87.38	90.91
Os05t0516600-01	Rice	plasma membrane	90.78	90.78
CDY16487	Canola	mitochondrion	90.78	90.78
EES18509	Sorghum	mitochondrion	90.29	90.29
CDX77257	Canola	mitochondrion	90.29	90.29
TraesCS1A01G337800.1	Wheat	plastid	89.81	89.81
TraesCS1B01G350200.1	Wheat	mitochondrion	89.81	89.81
TraesCS1D01G339700.2	Wheat	mitochondrion	89.81	89.81
TraesCS3A01G290200.1	Wheat	mitochondrion	89.32	89.32
TraesCS3B01G324900.1	Wheat	golgi	89.32	89.32
TraesCS3D01G290000.1	Wheat	mitochondrion	89.32	89.32
Zm00001d038709_P001	Maize	mitochondrion	90.29	89.0
HORVU3Hr1G071820.1	Barley	mitochondrion	88.83	88.83
Zm00001d010733_P002	Maize	plasma membrane	89.81	86.85
CDY52980	Canola	mitochondrion	84.95	84.95
CDY47530	Canola	mitochondrion	84.95	84.95
CDX87890	Canola	mitochondrion	84.95	84.95
CDY45632	Canola	mitochondrion	84.95	84.95
CDY02549	Canola	mitochondrion	84.95	84.95
CDY68571	Canola	mitochondrion	83.98	83.98
CDY56814	Canola	cytosol	62.14	76.19
CDX76258	Canola	cytosol	36.89	72.38
CDY48910	Canola	mitochondrion	70.87	70.87
CDY41473	Canola	mitochondrion	69.9	70.24
CDX91688	Canola	mitochondrion	69.9	70.24
CDX90732	Canola	mitochondrion	69.9	69.9
CDY05073	Canola	mitochondrion	69.42	69.42
CDX76964	Canola	cytosol	66.5	65.87
CDY15859	Canola	cytosol	66.99	65.71
CDY46234	Canola	cytosol	66.99	65.71
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	50.97	64.42
CDX76260	Canola	cytosol	38.84	62.99
CDY63374	Canola	mitochondrion	47.09	57.4

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078D256	EnsemblPlants:CDX82324	ProteinID:CDX82324	ProteinID:CDX82324.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00137441001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0001BA9184	:

Description

BnaA03g34970D

Coordinates

chrLK031828:-:612575..614515

Molecular Weight (calculated)

23030.1 Da

IEP (calculated)

4.814

GRAVY (calculated)

-0.411

Length

206 amino acids

Sequence
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: TWREEFLIQA SPSDPENFPF VLIGNKVDVD GGNSRVVSEK KAKAWCASKG NIPYFETSAK EGTNVEEAFQ CIAKNALKTG EEEELYLPDT IDVGTSNQPR
201: SSGCEC

Best Arabidopsis Sequence Match ( AT1G49300.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC

Arabidopsis Description

RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.