CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16487	Canola	mitochondrion	99.51	99.51
Bra014179.1-P	Field mustard	mitochondrion	99.51	97.62
AT1G49300.1	Thale cress	mitochondrion	96.12	96.12
CDY18548	Canola	plasma membrane	92.23	92.23
CDX92277	Canola	mitochondrion	91.75	91.75
CDX99311	Canola	mitochondrion	91.75	91.75
CDX95493	Canola	mitochondrion	91.75	91.75
CDY61984	Canola	mitochondrion	90.78	90.78
KRH24485	Soybean	mitochondrion	90.29	90.29
CDX82324	Canola	mitochondrion	90.29	90.29
KRH29476	Soybean	mitochondrion	90.29	90.29
PGSC0003DMT400001904	Potato	mitochondrion	90.29	90.29
Solyc01g109520.2.1	Tomato	plastid	90.29	90.29
VIT_03s0063g02420.t01	Wine grape	extracellular	88.83	88.83
CDY52980	Canola	mitochondrion	85.44	85.44
EES18509	Sorghum	mitochondrion	85.44	85.44
HORVU3Hr1G071820.1	Barley	mitochondrion	85.44	85.44
CDY47530	Canola	mitochondrion	85.44	85.44
CDY02549	Canola	mitochondrion	85.44	85.44
TraesCS3A01G290200.1	Wheat	mitochondrion	85.44	85.44
TraesCS3B01G324900.1	Wheat	golgi	85.44	85.44
TraesCS3D01G290000.1	Wheat	mitochondrion	85.44	85.44
HORVU1Hr1G076530.1	Barley	mitochondrion	82.04	85.35
Os05t0516600-01	Rice	plasma membrane	84.95	84.95
TraesCS1A01G337800.1	Wheat	plastid	84.47	84.47
TraesCS1B01G350200.1	Wheat	mitochondrion	84.47	84.47
TraesCS1D01G339700.2	Wheat	mitochondrion	84.47	84.47
CDY68571	Canola	mitochondrion	84.47	84.47
Zm00001d038709_P001	Maize	mitochondrion	85.44	84.21
CDY45632	Canola	mitochondrion	83.98	83.98
CDX87890	Canola	mitochondrion	83.98	83.98
CDY56814	Canola	cytosol	67.96	83.33
Zm00001d010733_P002	Maize	plasma membrane	84.95	82.16
CDX76258	Canola	cytosol	41.75	81.9
CDY41473	Canola	mitochondrion	69.42	69.76
CDX91688	Canola	mitochondrion	69.42	69.76
CDX76260	Canola	cytosol	42.72	69.29
CDY48910	Canola	mitochondrion	67.96	67.96
CDX90732	Canola	mitochondrion	66.5	66.5
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	52.43	66.26
CDY05073	Canola	mitochondrion	66.02	66.02
CDY46234	Canola	cytosol	66.02	64.76
CDY15859	Canola	cytosol	66.02	64.76
CDX76964	Canola	cytosol	65.05	64.42
CDY63374	Canola	mitochondrion	46.12	56.21

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:A0A078CKI9	EnsemblPlants:CDX77257	ProteinID:CDX77257	ProteinID:CDX77257.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00127948001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0004EB7162	:

Description

BnaC08g03020D

Coordinates

chrLK031810:-:332868..334602

Molecular Weight (calculated)

23126.2 Da

IEP (calculated)

4.819

GRAVY (calculated)

-0.473

Length

206 amino acids

Sequence
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV HYEDRIFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGNSRVVSEK KARAWCASKG NIPYYETSAK EGTNVEDAFM CITKNAMKSG EEEEMYMPDT IDVGTSNPQR
201: STGCEC

Best Arabidopsis Sequence Match ( AT1G49300.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC

Arabidopsis Description

RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.