CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
vacuole 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0516600-01	Rice	plasma membrane	99.51	99.51
Zm00001d038709_P001	Maize	mitochondrion	100.0	98.56
HORVU1Hr1G076530.1	Barley	mitochondrion	94.66	98.48
TraesCS1D01G339700.2	Wheat	mitochondrion	97.57	97.57
TraesCS1B01G350200.1	Wheat	mitochondrion	97.57	97.57
TraesCS1A01G337800.1	Wheat	plastid	97.57	97.57
Zm00001d010733_P002	Maize	plasma membrane	99.51	96.24
Bra022360.1-P	Field mustard	mitochondrion	91.26	91.26
CDX92277	Canola	mitochondrion	91.26	91.26
CDX99311	Canola	mitochondrion	90.78	90.78
CDY61984	Canola	mitochondrion	90.78	90.78
Bra001724.1-P	Field mustard	mitochondrion	90.29	90.29
CDX82324	Canola	mitochondrion	90.29	90.29
CDX95493	Canola	mitochondrion	90.29	90.29
CDY18548	Canola	plasma membrane	90.29	90.29
AT3G18820.1	Thale cress	mitochondrion	89.81	89.81
Bra037557.1-P	Field mustard	cytosol	79.13	89.56
PGSC0003DMT400001904	Potato	mitochondrion	89.32	89.32
Solyc01g109520.2.1	Tomato	plastid	89.32	89.32
VIT_03s0063g02420.t01	Wine grape	extracellular	89.32	89.32
KRH24485	Soybean	mitochondrion	87.86	87.86
KRH29476	Soybean	mitochondrion	87.86	87.86
AT1G49300.1	Thale cress	mitochondrion	85.92	85.92
CDY16487	Canola	mitochondrion	85.92	85.92
EES02212	Sorghum	mitochondrion	85.92	85.51
CDX77257	Canola	mitochondrion	85.44	85.44
Bra014179.1-P	Field mustard	mitochondrion	85.92	84.29
EES03521	Sorghum	mitochondrion	74.76	74.76
CDX76258	Canola	cytosol	36.41	71.43
OQU78358	Sorghum	cytosol	71.36	71.36
CDY56814	Canola	cytosol	57.77	70.83
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	42.72	66.67
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	49.51	62.58
CDX76260	Canola	cytosol	35.92	58.27

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	EntrezGene:8082976	UniProt:C5Z0Z3	EnsemblPlants:EES18509	ProteinID:EES18509
ProteinID:EES18509.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
EnsemblPlantsGene:SORBI_3009G198500	SUPFAM:SSF52540	unigene:Sbi.3260	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI000194B18E	RefSeq:XP_002440079.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:54889612..54892467

Molecular Weight (calculated)

22983.1 Da

IEP (calculated)

5.102

GRAVY (calculated)

-0.382

Length

206 amino acids

Sequence
(BLAST)

001: MASRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFDNLN
101: NWREEFLIQA SPSDPDNFPF VLLGNKVDVD GGNSRVVSEK KAKAWCASKG NIPYFETSAK DGTNVEDAFQ CIVKNALKNE PEEELYVPDT VDVVGGNRAQ
201: RSSGCC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.