Factsheet for Bra037557.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18548	Canola	plasma membrane	100.0	88.35
CDX95493	Canola	mitochondrion	99.45	87.86
Bra022360.1-P	Field mustard	mitochondrion	98.9	87.38
AT3G18820.1	Thale cress	mitochondrion	96.7	85.44
Bra001724.1-P	Field mustard	mitochondrion	96.15	84.95
KRH29476	Soybean	mitochondrion	95.05	83.98
KRH24485	Soybean	mitochondrion	95.05	83.98
PGSC0003DMT400001904	Potato	mitochondrion	94.51	83.5
Solyc01g109520.2.1	Tomato	plastid	94.51	83.5
VIT_03s0063g02420.t01	Wine grape	extracellular	93.96	83.01
Os05t0516600-01	Rice	plasma membrane	90.11	79.61
Bra014179.1-P	Field mustard	mitochondrion	91.76	79.52
HORVU1Hr1G076530.1	Barley	mitochondrion	86.26	79.29
EES18509	Sorghum	mitochondrion	89.56	79.13
TraesCS1D01G339700.2	Wheat	mitochondrion	89.01	78.64
TraesCS1B01G350200.1	Wheat	mitochondrion	89.01	78.64
TraesCS1A01G337800.1	Wheat	plastid	89.01	78.64
TraesCS3A01G290200.1	Wheat	mitochondrion	88.46	78.16
TraesCS3B01G324900.1	Wheat	golgi	88.46	78.16
TraesCS3D01G290000.1	Wheat	mitochondrion	88.46	78.16
HORVU3Hr1G071820.1	Barley	mitochondrion	88.46	78.16
Zm00001d038709_P001	Maize	mitochondrion	89.56	77.99
Bra018959.1-P	Field mustard	mitochondrion	86.26	76.21
Bra014320.1-P	Field mustard	mitochondrion	86.26	76.21
Zm00001d010733_P002	Maize	plasma membrane	89.01	76.06
Bra030395.1-P	Field mustard	mitochondrion	85.71	75.73
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	47.25	65.15
Bra038371.1-P	Field mustard	mitochondrion	69.78	61.65
Bra031220.1-P	Field mustard	cytosol	58.24	59.89
Bra000689.1-P	Field mustard	mitochondrion	67.58	59.71
Bra030274.1-P	Field mustard	cytosol	63.74	55.24
Bra016372.1-P	Field mustard	plastid	70.33	36.68

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra037557	EnsemblPlants:Bra037557.1	EnsemblPlants:Bra037557.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4F8Z4	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002544E70	:	:

Description

AT3G18820 (E=8e-102) ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B | ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding

Coordinates

chrA01:-:21936667..21937751

Molecular Weight (calculated)

20466.8 Da

IEP (calculated)

4.361

GRAVY (calculated)

-0.506

Length

182 amino acids

Sequence
(BLAST)

001: MNQYVNKKFS NQYKATIGAD FLTKEVQFED RLFTLQIWDT AGQERFQSLG VAFYRGADCC VLVYDVNSMK SFDNLNNWRE EFLIQASPSD PENFPFVVIG
101: NKVDVDGGNS RVVSEKKAKA WCASKGNIPY FETSAKEGTN VEEAFECIAK NALKSGEEEE LYLPDTIDVG TSNQQRSTGC EC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.