Factsheet for HORVU3Hr1G071820.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
vacuole 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G290000.1	Wheat	mitochondrion	99.51	99.51
TraesCS3B01G324900.1	Wheat	golgi	99.51	99.51
TraesCS3A01G290200.1	Wheat	mitochondrion	99.51	99.51
HORVU1Hr1G076530.1	Barley	mitochondrion	92.72	96.46
Bra022360.1-P	Field mustard	mitochondrion	90.29	90.29
CDX99311	Canola	mitochondrion	90.29	90.29
CDX92277	Canola	mitochondrion	90.29	90.29
AT3G18820.1	Thale cress	mitochondrion	89.32	89.32
CDY61984	Canola	mitochondrion	89.32	89.32
CDY18548	Canola	plasma membrane	89.32	89.32
CDX95493	Canola	mitochondrion	89.32	89.32
CDX82324	Canola	mitochondrion	88.83	88.83
Bra001724.1-P	Field mustard	mitochondrion	88.83	88.83
Bra037557.1-P	Field mustard	cytosol	78.16	88.46
Solyc01g109520.2.1	Tomato	plastid	88.35	88.35
PGSC0003DMT400001904	Potato	mitochondrion	88.35	88.35
VIT_03s0063g02420.t01	Wine grape	extracellular	87.86	87.86
KRH29476	Soybean	mitochondrion	87.86	87.86
KRH24485	Soybean	mitochondrion	87.86	87.86
CDY16487	Canola	mitochondrion	85.92	85.92
CDX77257	Canola	mitochondrion	85.44	85.44
AT1G49300.1	Thale cress	mitochondrion	84.47	84.47
Bra014179.1-P	Field mustard	mitochondrion	85.92	84.29
HORVU3Hr1G030910.4	Barley	mitochondrion	61.16	84.0
CDY56814	Canola	cytosol	59.71	73.21
CDX76258	Canola	cytosol	36.89	72.38
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	42.72	66.67
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	49.51	62.58
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	61.65	59.07
CDX76260	Canola	cytosol	36.41	59.06
HORVU3Hr1G067530.5	Barley	plastid	42.23	40.85

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	EMBL:AK362324	EMBL:AK364265	UniProt:F2DEK7	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
EnsemblPlantsGene:HORVU3Hr1G071820	EnsemblPlants:HORVU3Hr1G071820.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00019AA8BB	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DEK7]

Coordinates

chrchr3H:+:542981031..542984248

Molecular Weight (calculated)

23082.2 Da

IEP (calculated)

4.930

GRAVY (calculated)

-0.415

Length

206 amino acids

Sequence
(BLAST)

001: MASRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QYEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFDNLN
101: NWREEFLIQA SPSDPDNFPF VLLGNKVDID GGNSRVVSEK KAKAWCASKG NIPYFETSAK EGTNVEDAFQ CIVKDALKNE PEEELYIPDT VDVVGGNRTQ
201: RSPGCC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.