Factsheet for Bra036456.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 4
plasma membrane 3
golgi 3
plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	61.36	49.69
Bra037557.1-P	Field mustard	cytosol	65.15	47.25
Bra014179.1-P	Field mustard	mitochondrion	73.48	46.19
AT1G49300.1	Thale cress	mitochondrion	71.97	46.12
Solyc01g109520.2.1	Tomato	plastid	70.45	45.15
PGSC0003DMT400001904	Potato	mitochondrion	70.45	45.15
KRH29476	Soybean	mitochondrion	69.7	44.66
KRH24485	Soybean	mitochondrion	69.7	44.66
Bra001724.1-P	Field mustard	mitochondrion	68.94	44.17
Bra022360.1-P	Field mustard	mitochondrion	68.94	44.17
HORVU1Hr1G076530.1	Barley	mitochondrion	65.91	43.94
VIT_03s0063g02420.t01	Wine grape	extracellular	67.42	43.2
TraesCS3A01G290200.1	Wheat	mitochondrion	66.67	42.72
Os05t0516600-01	Rice	plasma membrane	66.67	42.72
HORVU3Hr1G071820.1	Barley	mitochondrion	66.67	42.72
EES18509	Sorghum	mitochondrion	66.67	42.72
TraesCS3B01G324900.1	Wheat	golgi	66.67	42.72
TraesCS3D01G290000.1	Wheat	mitochondrion	66.67	42.72
Bra018959.1-P	Field mustard	mitochondrion	66.67	42.72
Bra014320.1-P	Field mustard	mitochondrion	66.67	42.72
Bra030395.1-P	Field mustard	mitochondrion	65.91	42.23
TraesCS1A01G337800.1	Wheat	plastid	65.91	42.23
TraesCS1B01G350200.1	Wheat	mitochondrion	65.91	42.23
TraesCS1D01G339700.2	Wheat	mitochondrion	65.91	42.23
Zm00001d038709_P001	Maize	mitochondrion	66.67	42.11
Bra031220.1-P	Field mustard	cytosol	55.3	41.24
Zm00001d010733_P002	Maize	plasma membrane	65.91	40.85
Bra038371.1-P	Field mustard	mitochondrion	58.33	37.38
Bra030274.1-P	Field mustard	cytosol	56.82	35.71
Bra000689.1-P	Field mustard	mitochondrion	54.55	34.95
Bra016372.1-P	Field mustard	plastid	61.36	23.21

Protein Annotations

EnsemblPlants:Bra036456.1	EnsemblPlants:Bra036456.1-P	EnsemblPlantsGene:Bra036456	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase
InterPro:Small_GTPase	PANTHER:PTHR24073	PANTHER:PTHR24073:SF663	PFAM:PF00071	PFscan:PS51419	PRINTS:PR00449
SMART:SM00175	SUPFAM:SSF52540	UniParc:UPI0002540EC2	UniProt:M4F5V0	MapMan:22.8.1.7	:

Description

AT1G49300 (E=5e-047) ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding

Coordinates

chrA07:-:341092..341899

Molecular Weight (calculated)

15096.9 Da

IEP (calculated)

8.640

GRAVY (calculated)

-0.186

Length

132 amino acids

Sequence
(BLAST)

001: MKTASSLYRF VLYQVNYFLS FDSSWTRLSM TPKLQRFQSL GVAFYRGAVF CVLVYDVNSA KSFEYLNNWR EEFLIQASPS DPENFPFIVI GNKINVDGGN
101: SRVVLEKEAR AWCASKGNIP YYETSAKEGT NV

Best Arabidopsis Sequence Match ( AT1G49300.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSAKSFEDLN
101: NWREEFLIQA SPSDPENFPF VVIGNKIDVD GGSSRVVSEK KARAWCASKG NIPYYETSAK VGTNVEDAFL CITTNAMKSG EEEEMYLPDT IDVGTSNPQR
201: STGCEC

Arabidopsis Description

RABG3ERas-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.