Factsheet for Zm00001d010733_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038709_P001	Maize	mitochondrion	97.65	99.52
EES18509	Sorghum	mitochondrion	96.24	99.51
Os05t0516600-01	Rice	plasma membrane	95.77	99.03
HORVU1Hr1G076530.1	Barley	mitochondrion	91.08	97.98
TraesCS1D01G339700.2	Wheat	mitochondrion	93.9	97.09
TraesCS1B01G350200.1	Wheat	mitochondrion	93.9	97.09
TraesCS1A01G337800.1	Wheat	plastid	93.9	97.09
Bra022360.1-P	Field mustard	mitochondrion	87.79	90.78
CDX92277	Canola	mitochondrion	87.79	90.78
CDX99311	Canola	mitochondrion	87.32	90.29
CDY61984	Canola	mitochondrion	87.32	90.29
Bra001724.1-P	Field mustard	mitochondrion	86.85	89.81
CDX82324	Canola	mitochondrion	86.85	89.81
CDX95493	Canola	mitochondrion	86.85	89.81
CDY18548	Canola	plasma membrane	86.85	89.81
AT3G18820.1	Thale cress	mitochondrion	86.39	89.32
Bra037557.1-P	Field mustard	cytosol	76.06	89.01
VIT_03s0063g02420.t01	Wine grape	extracellular	85.92	88.83
PGSC0003DMT400001904	Potato	mitochondrion	85.92	88.83
Solyc01g109520.2.1	Tomato	plastid	85.92	88.83
KRH24485	Soybean	mitochondrion	84.51	87.38
KRH29476	Soybean	mitochondrion	84.51	87.38
AT1G49300.1	Thale cress	mitochondrion	82.63	85.44
CDY16487	Canola	mitochondrion	82.63	85.44
CDX77257	Canola	mitochondrion	82.16	84.95
Bra014179.1-P	Field mustard	mitochondrion	82.63	83.81
Zm00001d011717_P001	Maize	mitochondrion	64.32	72.87
CDY56814	Canola	cytosol	55.87	70.83
CDX76258	Canola	cytosol	34.74	70.48
Zm00001d038842_P001	Maize	cytosol	56.81	66.85
Bra036456.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid	40.85	65.91
CDY31983	Canola	endoplasmic reticulum, extracellular, golgi	47.42	61.96
CDX76260	Canola	cytosol	34.27	57.48
Zm00001d024267_P001	Maize	cytosol	26.29	50.45
Zm00001d036915_P002	Maize	cytosol	15.96	48.57
Zm00001d040564_P001	Maize	cytosol	29.11	41.06
Zm00001d047173_P001	Maize	cytosol	29.11	41.06
Zm00001d039546_P002	Maize	cytosol	25.82	39.57
Zm00001d028382_P003	Maize	cytosol	32.86	38.46
Zm00001d016749_P001	Maize	cytosol	30.99	34.38

Protein Annotations

EntrezGene:100272622	MapMan:22.8.1.7	Gene3D:3.40.50.300	UniProt:A0A1D6FTA4	ProteinID:AQK94769.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF663
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0008442049	EnsemblPlantsGene:Zm00001d010733	EnsemblPlants:Zm00001d010733_P002	EnsemblPlants:Zm00001d010733_T002

Description

Ras-related protein RABG3f

Coordinates

chr8:-:126285347..126288165

Molecular Weight (calculated)

23759.1 Da

IEP (calculated)

6.008

GRAVY (calculated)

-0.308

Length

213 amino acids

Sequence
(BLAST)

001: MASRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ VRLVTLAIWD TAGQERFQSL GVAFYRGADC CVLVYDVNSM
101: KSFDNLHNWR EEFLIQASPS DPDNFPFVLL GNKVDVDGGN SRVVSEKKAK AWCASKGNIP YFETSAKDGT NVEDAFQCIV KNALKNEPEE ELYVPDTVDV
201: VGGNRAQRSS GCC

Best Arabidopsis Sequence Match ( AT3G18820.1 )
(BLAST)

001: MPSRRRTLLK VIILGDSGVG KTSLMNQYVN KKFSNQYKAT IGADFLTKEV QFEDRLFTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NSMKSFENLN
101: NWREEFLIQA SPSDPENFPF VLIGNKVDVD DGNSRVVSEK KAKAWCASKG NIPYFETSAK VGTNVEEAFQ CIAKDALKSG EEEELYLPDT IDVGTSNQQR
201: STGCEC

Arabidopsis Description

RABG3FRas-related protein RABG3f [Source:UniProtKB/Swiss-Prot;Acc:Q9LS94]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.