Factsheet for Zm00001d040564_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047173_P001	Maize	cytosol	100.0	100.0
Zm00001d016749_P001	Maize	cytosol	97.35	76.56
Zm00001d024267_P001	Maize	cytosol	54.3	73.87
Zm00001d036915_P002	Maize	cytosol	27.15	58.57
Zm00001d038842_P001	Maize	cytosol	62.91	52.49
Zm00001d028382_P003	Maize	cytosol	59.6	49.45
OQU78358	Sorghum	cytosol	60.93	44.66
VIT_18s0001g02330.t01	Wine grape	cytosol	35.76	44.26
Zm00001d011717_P001	Maize	mitochondrion	53.64	43.09
TraesCS1B01G374600.1	Wheat	mitochondrion	54.3	39.42
TraesCS1D01G362800.1	Wheat	mitochondrion	54.3	39.42
TraesCS1A01G358000.1	Wheat	mitochondrion	53.64	38.94
Zm00001d039546_P002	Maize	cytosol	35.76	38.85
Os05t0536900-01	Rice	plastid	52.32	38.35
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	53.64	37.67
GSMUA_Achr7P23940_001	Banana	plasma membrane	50.33	37.07
VIT_18s0001g02250.t01	Wine grape	mitochondrion	50.33	37.07
Solyc04g072060.2.1	Tomato	plastid	48.34	35.78
KRH35042	Soybean	mitochondrion	48.34	35.44
KRG91731	Soybean	mitochondrion	47.68	34.95
Bra038371.1-P	Field mustard	mitochondrion	46.36	33.98
CDY48910	Canola	mitochondrion	46.36	33.98
AT1G22740.1	Thale cress	mitochondrion	45.03	33.5
CDX91688	Canola	mitochondrion	44.37	32.68
CDY41473	Canola	mitochondrion	44.37	32.68
CDX90732	Canola	mitochondrion	44.37	32.52
Bra000689.1-P	Field mustard	mitochondrion	44.37	32.52
CDY05073	Canola	mitochondrion	44.37	32.52
AT4G09720.3	Thale cress	mitochondrion	46.36	32.26
Zm00001d038709_P001	Maize	mitochondrion	41.06	29.67
Zm00001d010733_P002	Maize	plasma membrane	41.06	29.11
PGSC0003DMT400079981	Potato	mitochondrion	48.34	28.97
Bra016372.1-P	Field mustard	plastid	45.03	19.48

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6P7I0	ProteinID:AQL05790.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	ProteinID:ONM31561.1
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF479
SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTPase	UniParc:UPI000844082B	EnsemblPlantsGene:Zm00001d040564	EnsemblPlants:Zm00001d040564_P001
EnsemblPlants:Zm00001d040564_T001	:	:	:	:	:

Description

Ras-related protein RABG3a

Coordinates

chr3:-:50412645..50413878

Molecular Weight (calculated)

17359.4 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.630

Length

151 amino acids

Sequence
(BLAST)

001: MVPEKKAREW CASKGDIPYF ETSAKEVHNV DTAFLCIARL ALEHEHDQDM RSFNTLDTWH DEFLNQAGPS DPQRFPFILV GNKIDLDDGS KRMIRNTLQS
101: LCLSRRKAGE WCASKGDIPY FETSAKEDHN VDTAFLCMAR LALEHEHDQD M

Best Arabidopsis Sequence Match ( AT4G09720.2 )
(BLAST)

001: MQYKATIGAD FVTKELQIGE KLVTLQIWDT AGQERFQSLG AAFYRGADCC ALVYDVNVLR SFDNLETWHE EFLKQASPSD PKTFPFIVLG NKIDVDGGSS
101: RVVSDKKAAD WCASNGNIPY FETSAKDDFN VDEAFLTIAK TALANEHEQD IYFQGIPDAV TENEPKGGGC AC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.