Factsheet for TraesCS1D01G362800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G374600.1	Wheat	mitochondrion	98.08	98.08
TraesCS1A01G358000.1	Wheat	mitochondrion	97.6	97.6
OQU78358	Sorghum	cytosol	85.58	86.41
Os05t0536900-01	Rice	plastid	85.1	85.92
Zm00001d038842_P001	Maize	cytosol	74.52	85.64
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	86.54	83.72
TraesCS3D01G248400.1	Wheat	mitochondrion	79.33	80.1
VIT_18s0001g02250.t01	Wine grape	mitochondrion	76.92	78.05
KRH35042	Soybean	mitochondrion	76.92	77.67
KRG91731	Soybean	mitochondrion	76.44	77.18
GSMUA_Achr7P23940_001	Banana	plasma membrane	75.48	76.59
Solyc04g072060.2.1	Tomato	plastid	75.0	76.47
AT1G22740.1	Thale cress	mitochondrion	72.6	74.38
Zm00001d036915_P002	Maize	cytosol	25.0	74.29
CDY48910	Canola	mitochondrion	72.6	73.3
Bra038371.1-P	Field mustard	mitochondrion	72.6	73.3
CDY41473	Canola	mitochondrion	72.12	73.17
CDX91688	Canola	mitochondrion	72.12	73.17
CDY05073	Canola	mitochondrion	72.12	72.82
CDX90732	Canola	mitochondrion	72.12	72.82
Bra000689.1-P	Field mustard	mitochondrion	72.12	72.82
TraesCS1D01G339700.2	Wheat	mitochondrion	70.67	71.36
TraesCS3D01G290000.1	Wheat	mitochondrion	70.19	70.87
AT4G09720.3	Thale cress	mitochondrion	72.6	69.59
Zm00001d024267_P001	Maize	cytosol	37.02	69.37
TraesCS3D01G160100.2	Wheat	plastid	68.27	68.6
PGSC0003DMT400079981	Potato	mitochondrion	72.12	59.52
Zm00001d040564_P001	Maize	cytosol	39.42	54.3
Zm00001d047173_P001	Maize	cytosol	39.42	54.3
Zm00001d028382_P003	Maize	cytosol	46.63	53.3
VIT_18s0001g02330.t01	Wine grape	cytosol	30.77	52.46
Zm00001d039546_P002	Maize	cytosol	34.62	51.8
Zm00001d016749_P001	Maize	cytosol	41.83	45.31
Bra016372.1-P	Field mustard	plastid	73.08	43.55

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF479	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS1D01G362800
EnsemblPlants:TraesCS1D01G362800.1	TIGR:cd01862	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:444863701..444865880

Molecular Weight (calculated)

23262.7 Da

IEP (calculated)

6.264

GRAVY (calculated)

-0.299

Length

208 amino acids

Sequence
(BLAST)

001: MAMAPRRRTL LKVIVLGDSG VGKTSLMNQY VNKKFSQQYK ATIGADFLTK EVLIEDRLVT LQIWDTAGQE RFQSLGVAFY RGADCCVLVY DVNAKRTFNT
101: LGTWHDEFIN QAGPSDPKQF PFILVGNKVD LDAGSRRVVP EKKAKDWCVS KGDIPYFETS AKDDYNVDTA FLCIAKLALE HEHDQDIYFN SVAEQGPKTG
201: EQMSGCAC

Best Arabidopsis Sequence Match ( AT1G22740.1 )
(BLAST)

001: MSTRRRTLLK VIILGDSGVG KTSLMNQYVN NKFSQQYKAT IGADFVTKEL QIDDRLVTLQ IWDTAGQERF QSLGVAFYRG ADCCVLVYDV NHLKSFESLD
101: NWHNEFLTRA SPRDPMAFPF ILLGNKVDID GGNSRVVSEK KAREWCAEKG NIVYFETSAK EDYNVDDSFL CITKLALANE RDQDIYFQPD TGSVPEQRGG
201: CAC

Arabidopsis Description

RABG3BRas-related protein RABG3b [Source:UniProtKB/Swiss-Prot;Acc:O04157]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.