Factsheet for TraesCS1A01G358000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G374600.1	Wheat	mitochondrion	98.56	98.56
TraesCS1D01G362800.1	Wheat	mitochondrion	97.6	97.6
Zm00001d038842_P001	Maize	cytosol	74.52	85.64
Os05t0536900-01	Rice	plastid	84.62	85.44
OQU78358	Sorghum	cytosol	84.62	85.44
HORVU1Hr1G080330.4	Barley	endoplasmic reticulum	85.1	82.33
TraesCS3A01G248600.1	Wheat	mitochondrion	79.81	80.58
VIT_18s0001g02250.t01	Wine grape	mitochondrion	76.92	78.05
KRH35042	Soybean	mitochondrion	76.92	77.67
KRG91731	Soybean	mitochondrion	76.44	77.18
GSMUA_Achr7P23940_001	Banana	plasma membrane	75.48	76.59
Solyc04g072060.2.1	Tomato	plastid	75.0	76.47
Zm00001d036915_P002	Maize	cytosol	25.0	74.29
AT1G22740.1	Thale cress	mitochondrion	72.12	73.89
TraesCS3A01G152300.1	Wheat	mitochondrion	65.38	73.51
CDY48910	Canola	mitochondrion	72.6	73.3
Bra038371.1-P	Field mustard	mitochondrion	72.6	73.3
CDY05073	Canola	mitochondrion	72.12	72.82
CDX90732	Canola	mitochondrion	72.12	72.82
Bra000689.1-P	Field mustard	mitochondrion	72.12	72.82
CDY41473	Canola	mitochondrion	71.63	72.68
CDX91688	Canola	mitochondrion	71.63	72.68
TraesCS1A01G337800.1	Wheat	plastid	71.15	71.84
TraesCS3A01G290200.1	Wheat	mitochondrion	70.19	70.87
AT4G09720.3	Thale cress	mitochondrion	72.6	69.59
Zm00001d024267_P001	Maize	cytosol	36.54	68.47
PGSC0003DMT400079981	Potato	mitochondrion	72.6	59.92
Zm00001d040564_P001	Maize	cytosol	38.94	53.64
Zm00001d047173_P001	Maize	cytosol	38.94	53.64
Zm00001d028382_P003	Maize	cytosol	46.15	52.75
VIT_18s0001g02330.t01	Wine grape	cytosol	30.77	52.46
Zm00001d039546_P002	Maize	cytosol	34.13	51.08
Zm00001d016749_P001	Maize	cytosol	41.35	44.79
Bra016372.1-P	Field mustard	plastid	72.6	43.27

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF479	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS1A01G358000
EnsemblPlants:TraesCS1A01G358000.1	TIGR:cd01862	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:540152257..540154708

Molecular Weight (calculated)

23256.7 Da

IEP (calculated)

6.264

GRAVY (calculated)

-0.304

Length

208 amino acids

Sequence
(BLAST)

001: MAMAPRRRTL LKVIVLGDSG VGKTSLMNQY VNKKFSQQYK ATIGADFLTK EVLIEDRLVT LQIWDTAGQE RFQSLGVAFY RGADCCVLVY DVNVKRTFNT
101: LGTWHDEFIN QAGPSDPKQF PFILVGNKVD LDAGSRRVVP EKKAKDWCVS KGDIPYFETS AKDDYNVDPA FLCIAKLALE HEHDQDIYFN SVAEQGPKTE
201: GQTSGCAC

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.