Factsheet for TraesCS3A01G248600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G248400.1	Wheat	mitochondrion	99.51	99.51
TraesCS3B01G277200.1	Wheat	mitochondrion	99.51	99.51
Os01t0714900-01	Rice	plasma membrane	95.15	94.69
EES03521	Sorghum	mitochondrion	94.17	94.17
Zm00001d011717_P001	Maize	mitochondrion	82.04	89.89
GSMUA_Achr7P23940_001	Banana	plasma membrane	84.95	85.37
VIT_18s0001g02250.t01	Wine grape	mitochondrion	83.5	83.9
Solyc04g072060.2.1	Tomato	plastid	82.52	83.33
KRH35042	Soybean	mitochondrion	83.01	83.01
KRG91731	Soybean	mitochondrion	82.52	82.52
CDY48910	Canola	mitochondrion	81.07	81.07
Bra038371.1-P	Field mustard	mitochondrion	81.07	81.07
CDY41473	Canola	mitochondrion	80.58	80.98
CDX91688	Canola	mitochondrion	80.58	80.98
AT1G22740.1	Thale cress	mitochondrion	79.61	80.79
TraesCS1A01G358000.1	Wheat	mitochondrion	80.58	79.81
CDX90732	Canola	mitochondrion	79.13	79.13
Bra000689.1-P	Field mustard	mitochondrion	79.13	79.13
CDY05073	Canola	mitochondrion	78.64	78.64
TraesCS3A01G152300.1	Wheat	mitochondrion	69.9	77.84
AT4G09720.3	Thale cress	mitochondrion	80.1	76.04
TraesCS3A01G290200.1	Wheat	mitochondrion	73.3	73.3
TraesCS1A01G337800.1	Wheat	plastid	73.3	73.3
PGSC0003DMT400079981	Potato	mitochondrion	77.67	63.49
VIT_18s0001g02330.t01	Wine grape	cytosol	33.01	55.74
Bra016372.1-P	Field mustard	plastid	81.07	47.85

Protein Annotations

MapMan:22.8.1.7	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF586	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS3A01G248600
EnsemblPlants:TraesCS3A01G248600.1	TIGR:cd01862	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:466567550..466577395

Molecular Weight (calculated)

23158.3 Da

IEP (calculated)

4.924

GRAVY (calculated)

-0.367

Length

206 amino acids

Sequence
(BLAST)

001: MSTSRRRTLL KVIVLGDSGV GKTSLMNQYV HNKFSQQYKA TIGADFVTKE VLIEDRLVTL QIWDTAGQER FQSLGVAFYR GADCCVLVYD VNVNKSFDTL
101: NTWHDEFLNQ ASPSDPKTFP FILLGNKIDV DGGKSRVVSE KKAMDWCSSK GNIPYYETSA KEDYNVDEAF LSVAKLALEH ERDQDIYFQT VADPVPETEQ
201: RGGCAC

Best Arabidopsis Sequence Match ( AT4G09720.1 )
(BLAST)

001: MATRRRTLLK VIVLGDSGVG KTSLMNQYVH KKFSMQYKAT IGADFVTKEL QIGEKLVTLQ IWDTAGQERF QSLGAAFYRG ADCCALVYDV NVLRSFDNLE
101: TWHEEFLKQA SPSDPKTFPF IVLGNKIDVD GGSSRVVSDK KAADWCASNG NIPYFETSAK DDFNVDEAFL TIAKTALANE HEQDIYFQGI PDAVTENEPK
201: GGGCAC

Arabidopsis Description

ATRABG3ARAB GTPase homolog G3A [Source:UniProtKB/TrEMBL;Acc:F4JKR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.